Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0855 ATGTTCTCTGCGGCCAGTCTTCTCTTAAAACCCATTTTCTATCACTCGTTGTCTGCTTCTTTCCACCTAGTTTTGTTACTAGCGTTCCCCATTTCATGGGTGTGGAATAAAATTACTGCTGGTGCTAGAGATGGTCCCAAGGAGAAGTACAGGGGTGCTATGTATCTGAGGACCCTGTTTTGTTCTTTGGGTGCTTCTGCCTTTAATCTTGTCATGTGTTTACTGTGTTACTTCTATTGGTATAGAAATGGTTGGTCTGATGAAAAGTTCGTGGCCCTTTTGGATTTCACGCTTAAAACAGTGGCTTGGGGTGTCATTTGTGCTTACCTGCAGACAGGATTCTTCAATTCAGGTGAACTGAAATTTCCATTCTTCTTCAGAGCTTGGTGCGCTTTCTACCTCATTATTTCTGGCTATTGCTTTATACTGGACATTGTTCTCCATGTTAAACACGTTTTGTTGCCAGTTCAATACTTGATTTCTGATGGTGTCTCCTCCTTTGTGGCTATATTCTTTTGTTACGTGGTGATTTTGGTGAAAAATGAGAGTGAAGATAGCATTCTTCAAGAGCCTTTTTTGAATGATAATATTGATGTTAGTGATTCTGTAGAGACAAATACCAAGGGGGAAGAAACTGTTACTCCTTACTTAAATGCTGGACTTTTCAGCATTCTTACGTTCTCTTGGGTGGGTCCTCTAATTGCTGTGGGAAAGCAGAAAATTTTAGACATTGAGGATGTCCCACAACTAGCTACTTGTGACAGTGTTGCTGGAGCTTTTCCACCTTTCAGAAATCGACTTGAGGCTGGCTGTGGTACAATAAATAGAGTGACTACACTTGAGTTGGTGAAGTCATTATCACTCTCAGCTTGGAAAGAGATACTTGCCACAGGTATTCTTGCACTTCTAAACACTTTGGCTTCTTACGTTGGTCCATATCTCATTGACACTTTTGTTCAATACCTCAATGGCAAACAAACATTTAAGAATGAGGGATATGTTCTGGTGGCTGCATTTTTTCTTGCAAAGCTTGTTGAATGTCTGTCACAGAGGCATTGGCTCTTTAAATTGCAGCAAATTGGAGTTAGGATCCGAGCACAGCTTGTGACAGTGATTTATAGTAAAAGTTTGACCCTTTCTTGTCAAGCCAAGCAGAGCCACACTAGTGGAGAAATAATCAATTTTATCACTGTTGATGCTGAAAGAGTTGGTACTTTCAGTTGGTATATTCATAGTCTGTGGTTGGTAGTTCTGAAAGTTGTATTGGCCTTGTATATTTTGTATAAAAATCTTGGGTTGGCTTCTATTGCCACTTTTGTTGCTACTGTTATTGTAATGTTGGCAAATGTTCCTTTGGGGAAAATGCTTGAAAAGTTTCAAGAAAAGTTAATGGAGTCAAAAGATAGACGAATGAAGGCCACATCTGAGATTTTAAGGAACATCAGAATTCTCAAACTGCAGGGATGGGAAATGAAGTTTCTATATAAGGTTATTGAATTGAGGCAAACAGAGGAAGACTGGTTAAGGAAATACGTTTATACATTAGCCATTACCCTCTTTTTGTTTTGGAGTGCGCCCACTCTTGTATCTGTGGCTACATTTGGTACTTGTACTCTTGTAGGGATCCCACTCGAGTCAGGGAAGATCTTATCTGCACTTGCAACATTCCAAATTCTTCAGCAGGCCATTTATAACCTTCCAGATACAATTTCAATGATAGCACAAACTAAAGTATCATTGGATAGGATTGCATCATTCCTTCGGCTTGAGGACCTGCGGTCTGATGTTATAGTGAAACTTCCAAAGGGTAGTTCTAATACAGCAATTGAAGTAATTAATGGTAATTTCTCTTGGGACTTATCGTCCTCTAATACAACATTGAAAGGTATAAATCTCACTGTCACACAAGGCATGAGGGTTGCTGTCTGTGGTACTGTTGGTTCAGGCAAGTCCAGTCTACTGTCATGTATTTTGGGAGAAGTGCCAAAGATATCAGGAACAATAACAGTGTGTGGAACTAAGGCCTTTGTTGCTCAATCTGCATGGATTCAAAGTGGGAAGATCGAAGAGAATATATTGTTTGGTAAGGAGATGGACAGGGAAAGGTATGAGAAGGTCCTTGAAGCATGTTCCCTAAAGAAGGACCTGGAGATTCTGCCATTTGGTGATCAGACAATTATTGGAGAGAGGGGAATCAATTTGAGTGGTGGGCAGAAACAGAGAATTCAGATTGCACGAGCTCTCTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTTTTTAAGGAATGTTTACTAGGTTGTTTAAGTTCAAAGACAGTTATTTATATCACTCATCAAGTAGAGTTCTTACCTGCTGCCAACCTTATTCTGGTCATGAAAGATGGAGAAATTACTCAATGTGGGAAGTATGATGATTTGCTCAACTCAGGGACTGATTTTATTGAACTTGTTGGTGCACATAGAAAAGCATTATCTGCACTTAATTCACTTAATGAGGGGGAAGTGTCTGATAAATTAAATATAGCTGATCAAGAGGAAAGTACTTCTGGTGTACAAGTTACAGGGGAAAAAGAGGCAAACAATGATAGGCAAAGTGATGAAACAGATAACGTAGTTGAGCCAAAAGGCCAACTTATTCAAGAGGAAGAAAGGGAAAAAGGAAAGGTTGGGCTTTCAGTATATTGGAAATATATTACAATGGCATATGGAGGAGCTCTTGTACCATTTATATTGCTGGCTCAAATTCTGTGTCAACTTCTTCAAATTGGAAGCTACTATTGGATGGCTTGGGCAACTCCTATTTCTTCAGATGAGAAACCACTTGTTGGAGCCTTTATGCTTATAATTGTCTATGTTGCTCTGGCCTTGGGAAGTGCATTCTGTACTCTTGCTGAAGATATTTTTCTATCCACAGCTGGTTACAAGACTGCAACTCTACTCTTCAATAAAATGCACTCATGCATTTTCCGTGCACCCATGTCATTTTTTGATGCCACTCCAAGTGGAAGAATTATTAACAGAGCTTCTACAGATCAAACAGCAGTGGATTTAACCATTCCTTTACAAATTGGGTTATTTGCCTTATTTATGATTCAACTTTTAGGAACAATAGCAGTGATGTCTCAGGCTGCATGGCAGGTTTTCATCATCTTTATACCTGTGATATCAATCAGCATTTGGTATCAGCAATATTATTTACCATCAGCTCGAGAACTATCACGATTAGTTGGAGTGTGCAAAGCCCCAATCATTCAACACTTTGCTGAGACTATTTCAGGCACAACGACCATTAGGAGCTTTGATCAGGAGTCAAGATTTAAGGAAACAAATATGAAACTGATGGATGGGTATTCTCGGCCAAAATTTAACTCTGCTGCTGCTATGGAATGGCTTGGTTTCCGCTTGGATATGTTGTCTTCTATTACATTTGTCTTTTCCTTGATGTTCTTGATATTTATGCCAAGGGGAGTCATAGATCCTGCTATTGCTGGTTTGGTGGTTACATATGGACTTAATCTAAACTCATTACAAGCCTCGGTGATTTGGATTTTCTGCAACTTGGAGAACAAGTTTATATCAGTAGAGCGAATCCTTCAGTATTGTAGCATTCCAAGTGAGCCTCCTCTTGTAATAGAAGAAAATCGACCCAATCCTTCTTGGCCATCACACGGAGAAGTTGTCATTTGTGATCTGCAGGTCCGATATGCTCCACATCTACCACTTGTGTTGCGCGGTATAACTTGCAAATTCCTTGGGGGACTGAAAACTGGCATTGTTGGGAGAACTGGAAGTGGTAAAACAACTCTCATACATACAATTTTTCGAAGCATTGAGCCAACTGCTGGGCAAATTGTGATTGACAACATCAGCATTTCATCAATTGGACTTCATGATTTGAGGTCTAGACTTAGCATTATTCCTCAAGATCCAACCATGTTTGAAGGCACAGTGAGAAGTAACTTAGACCCATTGGAGGAGTACACGGATGAACAAATTTGGGAGGCTCTTGATAAGTGCCAACTTGGAGATGAAGTTCGAAAAAAAGAAGGAAAGCTAGACTCTGCTGTAAGCGAAAATGGTGAGAATTGGAGCATGGGGCAGAGGCAATTGGTGTGCCTTGGTAGGGTGCTACTTAAGAGAAGTAAGGTATTGGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCCACAGATAATTTAATTCAGCAAACTCTTCGGCAACACTTCTCTGATTGTACTGTCATTACAATTGCACACCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTGCTTCTCAATCAAGGATTGATTGAGGAGTTTGATTCTCCAACAAGATTGCTAGAGGACAAATCATCCTCATTTGCTCAGCTTGTTGCAGAGTATACCATGAGATCCAAGTCCACCTACCAATAA 4455 0.3998 MFSAASLLLKPIFYHSLSASFHLVLLLAFPISWVWNKITAGARDGPKEKYRGAMYLRTLFCSLGASAFNLVMCLLCYFYWYRNGWSDEKFVALLDFTLKTVAWGVICAYLQTGFFNSGELKFPFFFRAWCAFYLIISGYCFILDIVLHVKHVLLPVQYLISDGVSSFVAIFFCYVVILVKNESEDSILQEPFLNDNIDVSDSVETNTKGEETVTPYLNAGLFSILTFSWVGPLIAVGKQKILDIEDVPQLATCDSVAGAFPPFRNRLEAGCGTINRVTTLELVKSLSLSAWKEILATGILALLNTLASYVGPYLIDTFVQYLNGKQTFKNEGYVLVAAFFLAKLVECLSQRHWLFKLQQIGVRIRAQLVTVIYSKSLTLSCQAKQSHTSGEIINFITVDAERVGTFSWYIHSLWLVVLKVVLALYILYKNLGLASIATFVATVIVMLANVPLGKMLEKFQEKLMESKDRRMKATSEILRNIRILKLQGWEMKFLYKVIELRQTEEDWLRKYVYTLAITLFLFWSAPTLVSVATFGTCTLVGIPLESGKILSALATFQILQQAIYNLPDTISMIAQTKVSLDRIASFLRLEDLRSDVIVKLPKGSSNTAIEVINGNFSWDLSSSNTTLKGINLTVTQGMRVAVCGTVGSGKSSLLSCILGEVPKISGTITVCGTKAFVAQSAWIQSGKIEENILFGKEMDRERYEKVLEACSLKKDLEILPFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGCLSSKTVIYITHQVEFLPAANLILVMKDGEITQCGKYDDLLNSGTDFIELVGAHRKALSALNSLNEGEVSDKLNIADQEESTSGVQVTGEKEANNDRQSDETDNVVEPKGQLIQEEEREKGKVGLSVYWKYITMAYGGALVPFILLAQILCQLLQIGSYYWMAWATPISSDEKPLVGAFMLIIVYVALALGSAFCTLAEDIFLSTAGYKTATLLFNKMHSCIFRAPMSFFDATPSGRIINRASTDQTAVDLTIPLQIGLFALFMIQLLGTIAVMSQAAWQVFIIFIPVISISIWYQQYYLPSARELSRLVGVCKAPIIQHFAETISGTTTIRSFDQESRFKETNMKLMDGYSRPKFNSAAAMEWLGFRLDMLSSITFVFSLMFLIFMPRGVIDPAIAGLVVTYGLNLNSLQASVIWIFCNLENKFISVERILQYCSIPSEPPLVIEENRPNPSWPSHGEVVICDLQVRYAPHLPLVLRGITCKFLGGLKTGIVGRTGSGKTTLIHTIFRSIEPTAGQIVIDNISISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKRSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVLDSDMVLLLNQGLIEEFDSPTRLLEDKSSSFAQLVAEYTMRSKSTYQ 1484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0855 1484 Gene3D - 1222 1475 IPR027417 -
Mibi08g0855 1484 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 218 1473 - -
Mibi08g0855 1484 CDD ABC_6TM_ABCC_D2 920 1214 IPR044726 GO:0140359
Mibi08g0855 1484 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1473 IPR003439 GO:0005524
Mibi08g0855 1484 Gene3D ABC transporter type 1, transmembrane domain 883 1220 IPR036640 GO:0005524|GO:0016020
Mibi08g0855 1484 Gene3D ABC transporter type 1, transmembrane domain 275 590 IPR036640 GO:0005524|GO:0016020
Mibi08g0855 1484 MobiDBLite consensus disorder prediction 857 892 - -
Mibi08g0855 1484 FunFam ABC transporter C family member 10 278 591 - -
Mibi08g0855 1484 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 922 1202 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0855 1484 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 609 832 IPR003439 GO:0005524
Mibi08g0855 1484 Gene3D - 591 851 IPR027417 -
Mibi08g0855 1484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1469 IPR027417 -
Mibi08g0855 1484 ProSitePatterns ABC transporters family signature. 734 748 IPR017871 GO:0005524|GO:0016887
Mibi08g0855 1484 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 295 575 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0855 1484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 831 IPR027417 -
Mibi08g0855 1484 MobiDBLite consensus disorder prediction 857 871 - -
Mibi08g0855 1484 CDD ABCC_MRP_domain1 609 809 - -
Mibi08g0855 1484 CDD ABCC_MRP_domain2 1237 1457 - -
Mibi08g0855 1484 Coils Coil 456 476 - -
Mibi08g0855 1484 Pfam ABC transporter 1257 1404 IPR003439 GO:0005524
Mibi08g0855 1484 SMART AAA_5 636 809 IPR003593 -
Mibi08g0855 1484 SMART AAA_5 1265 1450 IPR003593 -
Mibi08g0855 1484 FunFam ABC transporter C family member 5 884 1220 - -
Mibi08g0855 1484 Pfam ABC transporter 627 761 IPR003439 GO:0005524
Mibi08g0855 1484 FunFam ABC transporter C family member 3 1222 1474 - -
Mibi08g0855 1484 CDD ABC_6TM_ABCC_D1 297 583 IPR044746 GO:0140359
Mibi08g0855 1484 SUPERFAMILY ABC transporter transmembrane region 288 590 IPR036640 GO:0005524|GO:0016020
Mibi08g0855 1484 Pfam ABC transporter transmembrane region 296 562 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0855 1484 Pfam ABC transporter transmembrane region 922 1165 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0855 1484 FunFam ABC transporter C family member 5 594 841 - -
Mibi08g0855 1484 MobiDBLite consensus disorder prediction 872 892 - -
Mibi08g0855 1484 SUPERFAMILY ABC transporter transmembrane region 920 1221 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0855 Mibi-ChrMibi08 19705736 19712016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0855 609 838 Calmodulin-binding Proteins AT2G36910 30.400 8.73e-25 110