Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0854 ATGTCGTTCGCTTTGGTGAATCTTCTCCAAAAACCCACTTTCTTGCACTTGTTGTCTGCTACTCTTCACTTAGTTTTGTTACTTGTAATTTTTTTCTCATGGGTGCGGAAAAAGTTTACATTGGATGCGAGAGATGGCTTCAAAGAGAAATTCATCAAGAGCTCTCAGTATAAGATGACTCTGTTCTTTACTTTTGGTGCTTTTGCATTTAACCTTGTTATGGGTCTCCTCTATTGCTTATATTGGTATGGAAATGATTGGTCTTATGAAAAGTTAGTGACCCTTTTGGATTTGGCTATTAAAACAGTTGCTTGGGGAATCTTATGTGCTTCATTGCGAGCAGGACGCTTCAATTCAGGTGAAAGGAGATTCTCATTGTTCTTCAGAGCTTGGTGTGTCTTCTACCCCCTCATTTCCTGTCATTGTTTTGTGCTGGACATTATTCTCCATCTAAAACACGTGTTGTTGCCAATTCAGTGCTTAATTTCTGATGGTATCTCCTTTTTCTTGAGTTTATTCTTGTGTTACATGGTGTTCTTTGTGAAACATGAGGGTGAAGAGAACATTCTTCAAGAGCCTCTTTTGAATGATGTTAGTAATGCATTAGAGTTCAATAAGACCAAGGGGAAGGAACATGTTACTCCTTACTCAAATGCTGGACTCTTCAGCATTCTTACCTTCTCTTGGGTGGGTCCTCTAATTGATGCTGGCAAAAGGAAAACCTTAAATCTTGAGGATGTCCCACAACTAGCTAGTTGTGATAGAGTAGTTGGAGCTTTTCCAGCTTTTAGGAATAAACTTGAGGATGAACGTGGTTCATTAAAGAGAGTGACTACACTTAAGCTGGCAAAGTCATTGATACTCTCATCTTGGAAAGGGATATTTGCAACAGCTTTAGTTGCACTTTTAAACACTCTGACTTCTTATGTTGGTCCATTTCTCATTGATACTTTTGTTCAATGCCTCAATGGCAAACAAACATTCAAGAATGAGGGATATGTCTTGGTGGCTGCTTTTTTGACAGCAAAGCTTATAGAGTGTTTGTCACATAGGCAATGGTTTTTTAGGTTAAAGCAAGTTGGAATAAAGACCCGAGCACTGCTCGTGACAGTAGTCTATAATAAAGGGTTGACCCTTTCATGTCAGTCCAAGCAAGGCCACACAACGGGTGAAATAATCAATTTCATGACAGTTGATGCTGAAAGAGTTGGAGACTTTGCTTGGAACATGCATGATCCATGGATAGCAGTACTGCAAGTTGCATTGGCCATGCTTATTTTGTATAGAAATCTTGGAATGGCTTCGATTGCAGCTTTTATTGCAACTGTTGCTGTAATGCTTACAAATATTCCCTTTGTGTCTTTGCAAGAAACATATCAAGACAAGTTGATGGAATCAAAAGATAGAAGAATGAAGGTCACCTCTGAGATTTTAAGGAATATGAGAATTCTGAAACTACAGGGATGGGAAATGAAGTTTCTGTCTAACATTATTGATCTGAGGAACACAGAGCAAAGCTGGTTAAGGAAATATGTCTATACTTCAGCCATGACCACTTTTGTCTTACGTAGTGCCCCCGCGTTTGTATCAGTGGTTACTTTTTGTACCTGTGTACTTATAGGTATCCCACTTGAATCAGGGAAGATCTTATCTGCTATTGCAACATTCCGAATGCTTCAAGAGCCTGTTTATAAGCTTCCAGAGACAATTTCAATGATAGCACAAACTAAGGTATCTCTGGCTAGGATTGCATCATTCCTTAGTCTTGATGACCTGCAGCCTAATGTTATAGAAAAGATTCCAAGGGGTAGTTCTAACATAGCAGTTGAATTAATTGACGGCAATTTTTCTTGGGATTTTTCGTCTCCTAATAGAACATTGAAAGGTATAAATCTCACGATCCTGCAAGGCATGAGAGTTGCTGTTTGTGGTACTGTTGGTTCGGGCAAGTCTAGTCTTATATCTTCTATTCTAGGAGAAGTGCCAAAGATATCTGGAATCCTGAGGGTGTGTGGAACTAAAGCCTTTGTTGCTCAGTCTCCATGGATTCAAAGTGGCACGATCGAAGAGAATATATTATTTGGTAAGGAGATGGATAGGGAAAGGTATGAGAAGGTCCTTGAAGCATGCTCCCTAAAGAAGGACCTAGAAATTTTGCCATTTTGTGATCAGACATTTATTGGAGAAAGAGGAATCAATTTAAGTGGTGGGCAGAAACAAAGGATACAAATTGCACGAGCTCTATACCAAGACGCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCCCACCTCTTTAAGGTCATGAAAGATGGGGAAATTACTCAATGTGGAAGGTATAATGATATACTTAACTCAGGGACTGACTTTATGGAACTTGTTGGTGCACATAGAAAAGCATTGTCTGCACTCGATTCATTTGATGAAGGCGAAGTATTTGATGAATTAAATGCAAAAGTTATAGAAGAAAAAGAGACAAACAAAGATAGGCAAAGTGTCCAAATAGATGTTGTGGTTGAACCAAGAGGCCAGCTCATTCAACAAGAAGAAAGGGAGAAAGGTAGAGTTGGGTTTTCAGTCTATTGGAAATATATTACCACAACATTTGGAGGAGTTCTTGTACCATTTATATTGTTGGCTCAGATTCTGTTTCAACTTCTTCAAATTGGAAGCAACTATTGGATGGCGTGGGCAACTCCCATTTCACAGGATGTAAAAGCGCCTGTTGGATCCTTTATGCTTGTAATTGTCTATGTTGCTCTGGCCATAGGAGGTTCTTTCTGCATCCTTGCCAGCGAAATGCTTATCTCTACTGCTGGTTTTAAGACTGCGAGTATACTATTCTACAAAATGCACAAGTGCATTTTCCGTGCCCCTATGTCATTTTTTGATGCCACTCCAAGTGGAAGAATCATTAGTAGAGCTTCTACAGACCAAAGAATCATAGATCCAGGCATTGCTGGATTAGCTGTTACATATGGACTTAACCTGAACTTGTTACAAGTTTGGGTGATGATAGATCTTAGCAAAATTGAAAATAAAATTATATCAGTGGAGAGAGTACTGCAGTATAGTAGCATTCCAAGTGAGCCACCTCTTGTAATAGAAGACAACCAGCCTTGTCCTTCTTGGCCTTCTCATGGGGAAGTTGATATTTGTGACTTACAGGTTCGTTATGCGCCGCATTTACCACTTGTCTTACGTGGCATAACATGCAAATTCCTCGGAGGAGTGAAAACCTGCATAGTCGGTAGAACAGGCAGTGGTAAAACAACTCTCATACAAACACTTTTTAGGATCATTGAGCCGAGAACCGGGAAAATTGTGATTGATGGCATCAACATCTCATCAATTGGACTTCATGATTTGAGGTCCAAACTTACTATTATTCCTCAAGATCCAACCATGTTTGAAGGGACAGTGAGAAGTAATCTAGACCCTTTGGAAGAGCACACAGATGAGCAAATTTGGGAGGCAAGTTTTGAGAACGGTGAGAATTGGAGCATGGGTCAGAGGCAATTGGTGTGCCTTGGCAGGGTGCTGCTTAAGAGAAGTAAGGTTTTAGTGCTAGATGAAGCTACTGCGTCAGTTGATACCGCCACGGATAATTTGATTCAGCAAACTCTTCAGCAACACTTCTCTGATTGTACTGTTATTACTATTGCACATAGAATAACTTCTGTTCTTGACAGTGATATGGTTCTGCTGCTTAATGAAGGACTAATTGAAGAGTATGATTCACCTTCAAGATTGTTAGAGGACAAGTCATCCTCATTTGCTCAGCTTGTTGCAGAATATACCATGAGATCCAAGTCCAGATTAGAGTGA 3849 0.3975 MSFALVNLLQKPTFLHLLSATLHLVLLLVIFFSWVRKKFTLDARDGFKEKFIKSSQYKMTLFFTFGAFAFNLVMGLLYCLYWYGNDWSYEKLVTLLDLAIKTVAWGILCASLRAGRFNSGERRFSLFFRAWCVFYPLISCHCFVLDIILHLKHVLLPIQCLISDGISFFLSLFLCYMVFFVKHEGEENILQEPLLNDVSNALEFNKTKGKEHVTPYSNAGLFSILTFSWVGPLIDAGKRKTLNLEDVPQLASCDRVVGAFPAFRNKLEDERGSLKRVTTLKLAKSLILSSWKGIFATALVALLNTLTSYVGPFLIDTFVQCLNGKQTFKNEGYVLVAAFLTAKLIECLSHRQWFFRLKQVGIKTRALLVTVVYNKGLTLSCQSKQGHTTGEIINFMTVDAERVGDFAWNMHDPWIAVLQVALAMLILYRNLGMASIAAFIATVAVMLTNIPFVSLQETYQDKLMESKDRRMKVTSEILRNMRILKLQGWEMKFLSNIIDLRNTEQSWLRKYVYTSAMTTFVLRSAPAFVSVVTFCTCVLIGIPLESGKILSAIATFRMLQEPVYKLPETISMIAQTKVSLARIASFLSLDDLQPNVIEKIPRGSSNIAVELIDGNFSWDFSSPNRTLKGINLTILQGMRVAVCGTVGSGKSSLISSILGEVPKISGILRVCGTKAFVAQSPWIQSGTIEENILFGKEMDRERYEKVLEACSLKKDLEILPFCDQTFIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKVMKDGEITQCGRYNDILNSGTDFMELVGAHRKALSALDSFDEGEVFDELNAKVIEEKETNKDRQSVQIDVVVEPRGQLIQQEEREKGRVGFSVYWKYITTTFGGVLVPFILLAQILFQLLQIGSNYWMAWATPISQDVKAPVGSFMLVIVYVALAIGGSFCILASEMLISTAGFKTASILFYKMHKCIFRAPMSFFDATPSGRIISRASTDQRIIDPGIAGLAVTYGLNLNLLQVWVMIDLSKIENKIISVERVLQYSSIPSEPPLVIEDNQPCPSWPSHGEVDICDLQVRYAPHLPLVLRGITCKFLGGVKTCIVGRTGSGKTTLIQTLFRIIEPRTGKIVIDGINISSIGLHDLRSKLTIIPQDPTMFEGTVRSNLDPLEEHTDEQIWEASFENGENWSMGQRQLVCLGRVLLKRSKVLVLDEATASVDTATDNLIQQTLQQHFSDCTVITIAHRITSVLDSDMVLLLNEGLIEEYDSPSRLLEDKSSSFAQLVAEYTMRSKSRLE 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0854 1282 Pfam ABC transporter transmembrane region 296 562 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0854 1282 Pfam ABC transporter transmembrane region 883 996 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0854 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1046 1267 IPR027417 -
Mibi08g0854 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 883 990 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0854 1282 FunFam Multidrug resistance-associated protein 4 596 776 - -
Mibi08g0854 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 295 575 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0854 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1057 1271 IPR003439 GO:0005524
Mibi08g0854 1282 CDD ABCC_MRP_domain1 609 774 - -
Mibi08g0854 1282 CDD ABCC_MRP_domain2 1055 1255 - -
Mibi08g0854 1282 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 216 990 - -
Mibi08g0854 1282 FunFam ABC transporter C family member 10 278 591 - -
Mibi08g0854 1282 Gene3D ABC transporter type 1, transmembrane domain 843 990 IPR036640 GO:0005524|GO:0016020
Mibi08g0854 1282 Gene3D ABC transporter type 1, transmembrane domain 264 591 IPR036640 GO:0005524|GO:0016020
Mibi08g0854 1282 Pfam ABC transporter 1075 1202 IPR003439 GO:0005524
Mibi08g0854 1282 Pfam ABC transporter 627 761 IPR003439 GO:0005524
Mibi08g0854 1282 SMART AAA_5 1083 1248 IPR003593 -
Mibi08g0854 1282 SMART AAA_5 636 833 IPR003593 -
Mibi08g0854 1282 CDD ABC_6TM_ABCC_D1 297 583 IPR044746 GO:0140359
Mibi08g0854 1282 FunFam ABC transporter (MsbA subfamily) 1043 1270 - -
Mibi08g0854 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 802 IPR027417 -
Mibi08g0854 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 609 835 IPR003439 GO:0005524
Mibi08g0854 1282 SUPERFAMILY ABC transporter transmembrane region 285 588 IPR036640 GO:0005524|GO:0016020
Mibi08g0854 1282 Gene3D - 1040 1273 IPR027417 -
Mibi08g0854 1282 SUPERFAMILY ABC transporter transmembrane region 868 999 IPR036640 GO:0005524|GO:0016020
Mibi08g0854 1282 ProSitePatterns ABC transporters family signature. 734 748 IPR017871 GO:0005524|GO:0016887
Mibi08g0854 1282 Gene3D - 595 817 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0854 Mibi-ChrMibi08 19696816 19702842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0854 609 809 Calmodulin-binding Proteins AT2G36910 26.908 1.46e-16 84.0