Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0853 ATGTTGTTCCCTTTTGCGGATCATCTCATAAACCCCATTTTCTTACACTTGTTATCTGCTTCTCTCCATTTAGTACTGTTACTTGCGTTTATTGGTTTATGGATTCGGAATAAAATTGCACAAGGTTCTAGTGATGGTTCCAAAAAGAAATTTAGAAGCACTCTGCTTATGAGAACTCTGTTTAGTACTTTGGGTGCTTTAGCATTTAATCTTGCCATTCATCAAATGTATTATTACTTCTTTTGGTATATAAATGGTTGGTTGGATGAAACTTTTGTGACCCTTTTGGATTTGGCGCTTAAAATAGTTGCTTGGAGTGTTATTTGGGCTTGCTTGCGCACAGCATTCTTCAGTTCAAGTTATGTGAATTTTCCATTTTTCTTCAGAAGTTGGTGCGCTTTCTCCCTCCTTATTTCCTGTTATTGTTTTTTGCTGGACATTTTTCTCCATAGAAAAGATGTTCAGCTAACCACCACTCAATATATGATTTCTGATGCTGTCTCCTTCATTGTGAGCCTATTCATTTGTTACTTGGGATTTTCTGAGAAAAATGAGGGTGGAGAAAGTATTCTTCAAGAGCCTCTTTTGAAGGATAATAATAAAACCAAAGGGGAAGAAACTGTTACCCCTTACTCACATGCTGGAATTTTCAGCATTCTTACCTTCTCTTGGGTGGGTCCTTTGATTGATACTGGCAAAAATAAGACTTTAGACTTTGAGGATGTTCCGCAACTAGCAAGTTGTGATAGTATAGTTGGAGCTTTTGCTGCTTTCAGGAATAAACTTGAGTCTGACTGTGGCAGCATAAAGAGAGTGACCACACTTAAGCTGGTAAAGTCATTGATTCACTCAGCTTGGAAAGAGAATATTGTAACAGCTTGTCTTGCACTTTTGAACACATTGGCTTCTTATGTTGGTCCATACCTCATCGATTCCTTTGTTCAAAACCTTAATGGCGAAGAAACTTTTAAGAATGAAGGTTGTCTTTTGGTGGTAGCATTTTTTGTTGCAAAGCTTATAGAGTGCCTGTCACAAAGGCAAAGGATCTTTAGATTACAACAAGTTGGAGTCAGGATCCGAGCACTTCTTGTGACAATGATTTATAGTAAAGGTTTGACTCTTTCATGCCAATCCAGGCAGGAGCACACTACTGGGGAAATGATCAATCTTATGGCAGTTGATGCCGAAAGAGTTGGTGACTTCTGTCGTTACATGCATCACTTTTGGATGGTAGTTTTGGAAATTGTATTGGCCTTATTTATTTTGTATAAAAATCTTGGGGTGGCTTCCATTTCAGCTTTTGTTGCAACTGTTATTGTAATGATGACAAATATTCCTTTGGGGTCATTACAAAAAAAATTTCAAGGAAAGTTGATGGGGTCAAAGGATAGAAGAATGAAGGCCACATCTGAGATTTTAAGGAACATGAGGATTCTGAAACTATTGGGATGGGAAATAAAGTTTCTGTCTAAAGTCATTGAATTGAGGAACAAAGAGGAAAGCTGGTTAAGGAAATATGTTTCTACAACAGCCATCACCACTTTTGTCTTTTGGGTCGCACCCACATTTGTTTCTGTGGTTACTTTTAGTACTTGTGTACTTAGAAGGATTACACTTGAATCTGGAAAGATCTTATCTTCACTTGCTACATTCCGGATACTTCAGAAGTCTATTTATAGTCTTCCGGACACACTGTCAATGATAGCACAAACTAAGGTATCTCTAGATAGGATTGCATCATTCTGTTGTCTCGACGATTTGCAGTCAGATGCTGTAGAGAAGCTTCCAAAGGGTAGTTCTGATATAGCAATTGAAGTGATTAACGGAAATTTCTCTTGGGATTCATCTTTACCTAATATGACATTGAAAAACATAGACCTTAGAATATTTAAAGGCATTAGAGTTGCTATTTGTGGTACTGTTGGTTCAGGCAAGTCTAGTCTGCTTTCTTCTTTTCTGGGAGAAGTTCCAAAGAAATCAGGAATATTGAGAATGTGTGGAACAAAGGCCTTTGTTGCTCAATCTCCATGGATTCAAAGTGGCAAGATCGAAGAGAATATACTATTTGGGAAGGACATGGATAGGAAAATATATGACAAGGTCCTTGACGCTTGCTGCCTGAAGAAGGACTTGGAGATTTTGCCATTTGGGGATCAGACAATTGTTGGGGAGAGAGGATTAAATTTAAGTGGTGGGCAGAAACAAAGAATACAAATTGCTCGAGCTCTTTACCAAGATTCTGATATATATCTATTTGATGATCCATTTAGTGTTGTGGATGCTCATACAGGATCACACCTCTTTAAGGAATGTTTATTACGCTTTTTAAGTTCAAAGACAGTCATTTATGTTACTCATCAAGTAGAGTTCTTACCTGTTGCTGACCTTATCTTGGTAATGAAAGATGGTAAAATTACTCAATGTGGAAAGTACAATTATTTACTCAACTCAGGGACCGACTTTATCAAACTTGTTGGTGCACATAGAAAAGCTTTGTCTGCACTTGATTCAATAGATGGAGGGGAAGTATCTGATAAAGTAAGTATTTCAGAAGAGGTAAATATCTCTGGTTCAAAAATCAAAGAAGAAAAAGGGGTAAATATCTTGGGTTCAAAAATGAAAGAAGAAAAAGAGGTAAGCAAATGTATGCTAAGCGGGAAAACAGATGATGTGGTTGAACCAAAAGGCCGGCTTGTTCATGAGGAAGAAAGGGAGAAAGGTAAAGTTGGGCTCTCAGTCTATTGGAAATTTATTACAATAGCATATGGAGGAACTCTTGTACCATGTCTATTGCTGGCACAAATTCTATTTCAATTTTTTCAAATTGGCAGCAACTATTGGATGGCATGGGCAACTCCTATTTCATCAGATGTGAAACCACTAGTCACTGCCTATACTCTTATAACTACTTATGTTGCTATATCCATAGGAAGTTCTCTTTTTATCCTTGCCAGAGCAATACTTCTTTCTGTTGTTGGTTATAAGACTGCAGCTGTACTCTTCAGTAAAATGCACCTGTGCATTTTCCGTGCCCCTATGTCATTTTTTGATGCCACTCCAAGTGGAAGGATCATTAATAGAGCTTCTACAGACCAAAGCGCAGTGGATTTAAGCATTCCCTATCAAGTTGGGCCATTTGCCTACACTGTAATTGAGCTCCTGGGAAATATAGCAGTAATGTCTCAGGCTGCTTGGCAAGTTTTCATCATCTTTATACCTGTGATATCTGTCAGCATTTGGTATCAGCAATATTATATATCAGCTGCTCGAGAACTATCACGGTTAGTTGGAGTATGTAAAGATCCAATCATTCAGCACTTTGCTGAAACAATTTTAGGATCAACCACAATCAGGAGCTTTGACCAAGAATCAAGATTTTCAAAAACAAACATGAGATTAATGGATAAGTATTCTCGGCCGATGTTCAATAATTTTGGTGCTATGGAATGGTTATGCTTTCGTTTGGATATGTTGTCTTCTATCACTTTTGCCTTTTCCTTGATATGTTTGGTATTTATGCCAAGGGGTGCCATAGATCCAGGTATTGCTGGTTTAATTGTTACATATGGACTTAGTCTGAACTCGTTGCAAGCTTCGTTGATAACCACTTTATGCAAGATGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTACAGTTGCATTCCCAGTGAACCTCCTCTTGAAATAGAAGAAAATCGACCAGTTGCTTCTTGGCCATCACATGGAGAAGTTGCTATTTGCGATCTACAGGTTCGTTATGCCCCTCATCTTCCACTTGTATTGCATGGCGTGACATGTAAACTCCCTGGAGGACAAAAAACTGGCATTGTAGGGAGAACGGGAAGTGGTAAAACAACTCTCATACAAACACTTTTTCGAATCATTGAGCCAACTGCTGGGAAAATTATGATTGATGGCATCAACATCTCATCACTTGGACTTCATGATTTGAGGTCTAGACTTAGTATTATTCCTCAAGATCCAACTATGTTTGAAGGCACAATCAGAAGTAACCTGGACCCATTGGAAGAGTACAATGATGAACAAATTTGGGAGGCTCTAGATATGTGTCAACTTGGTGATGTAGTTCGAAAGAAAGAAGGAATGCTAGACTCTGCTGTTAGTGAAAATGGTGAGAATTGGAGCATGGGACAAAGGCAATTGGTATGTCTTGGTAGGGTATTACTTAAGAGAAGTAAAGTGTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACCGCTACAGATAATTTGATTCAGCAAACTCTTAGGCATCACTTCTCTGATTGTACTATCATTACAATTGCACATAGAATAACTTCTGTTCTTGACAGTGATATGGTTCTGCTTCTCGACGAAGGGGTTATTGACGAGTATGACTCACCCACAATATTGCTAGAAAATAAATCATCTTTTGCTCAACTTGTAGCTGAGTATACCATGAGATCCAAGGCAAGTTTAGAGTAA 4473 0.3818 MLFPFADHLINPIFLHLLSASLHLVLLLAFIGLWIRNKIAQGSSDGSKKKFRSTLLMRTLFSTLGALAFNLAIHQMYYYFFWYINGWLDETFVTLLDLALKIVAWSVIWACLRTAFFSSSYVNFPFFFRSWCAFSLLISCYCFLLDIFLHRKDVQLTTTQYMISDAVSFIVSLFICYLGFSEKNEGGESILQEPLLKDNNKTKGEETVTPYSHAGIFSILTFSWVGPLIDTGKNKTLDFEDVPQLASCDSIVGAFAAFRNKLESDCGSIKRVTTLKLVKSLIHSAWKENIVTACLALLNTLASYVGPYLIDSFVQNLNGEETFKNEGCLLVVAFFVAKLIECLSQRQRIFRLQQVGVRIRALLVTMIYSKGLTLSCQSRQEHTTGEMINLMAVDAERVGDFCRYMHHFWMVVLEIVLALFILYKNLGVASISAFVATVIVMMTNIPLGSLQKKFQGKLMGSKDRRMKATSEILRNMRILKLLGWEIKFLSKVIELRNKEESWLRKYVSTTAITTFVFWVAPTFVSVVTFSTCVLRRITLESGKILSSLATFRILQKSIYSLPDTLSMIAQTKVSLDRIASFCCLDDLQSDAVEKLPKGSSDIAIEVINGNFSWDSSLPNMTLKNIDLRIFKGIRVAICGTVGSGKSSLLSSFLGEVPKKSGILRMCGTKAFVAQSPWIQSGKIEENILFGKDMDRKIYDKVLDACCLKKDLEILPFGDQTIVGERGLNLSGGQKQRIQIARALYQDSDIYLFDDPFSVVDAHTGSHLFKECLLRFLSSKTVIYVTHQVEFLPVADLILVMKDGKITQCGKYNYLLNSGTDFIKLVGAHRKALSALDSIDGGEVSDKVSISEEVNISGSKIKEEKGVNILGSKMKEEKEVSKCMLSGKTDDVVEPKGRLVHEEEREKGKVGLSVYWKFITIAYGGTLVPCLLLAQILFQFFQIGSNYWMAWATPISSDVKPLVTAYTLITTYVAISIGSSLFILARAILLSVVGYKTAAVLFSKMHLCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPYQVGPFAYTVIELLGNIAVMSQAAWQVFIIFIPVISVSIWYQQYYISAARELSRLVGVCKDPIIQHFAETILGSTTIRSFDQESRFSKTNMRLMDKYSRPMFNNFGAMEWLCFRLDMLSSITFAFSLICLVFMPRGAIDPGIAGLIVTYGLSLNSLQASLITTLCKMENKIISVERILQYSCIPSEPPLEIEENRPVASWPSHGEVAICDLQVRYAPHLPLVLHGVTCKLPGGQKTGIVGRTGSGKTTLIQTLFRIIEPTAGKIMIDGINISSLGLHDLRSRLSIIPQDPTMFEGTIRSNLDPLEEYNDEQIWEALDMCQLGDVVRKKEGMLDSAVSENGENWSMGQRQLVCLGRVLLKRSKVLVLDEATASVDTATDNLIQQTLRHHFSDCTIITIAHRITSVLDSDMVLLLDEGVIDEYDSPTILLENKSSFAQLVAEYTMRSKASLE 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0853 1490 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 604 827 IPR003439 GO:0005524
Mibi08g0853 1490 FunFam ABC transporter C family member 3 1229 1480 - -
Mibi08g0853 1490 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 290 570 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0853 1490 ProSitePatterns ABC transporters family signature. 729 743 IPR017871 GO:0005524|GO:0016887
Mibi08g0853 1490 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1246 1480 IPR003439 GO:0005524
Mibi08g0853 1490 CDD ABCC_MRP_domain1 604 804 - -
Mibi08g0853 1490 SUPERFAMILY ABC transporter transmembrane region 929 1227 IPR036640 GO:0005524|GO:0016020
Mibi08g0853 1490 FunFam ABC transporter C family member 5 589 836 - -
Mibi08g0853 1490 CDD ABC_6TM_ABCC_D2 927 1221 IPR044726 GO:0140359
Mibi08g0853 1490 Pfam ABC transporter 622 756 IPR003439 GO:0005524
Mibi08g0853 1490 FunFam ABC transporter C family member 10 273 586 - -
Mibi08g0853 1490 Gene3D - 1229 1481 IPR027417 -
Mibi08g0853 1490 Gene3D - 584 837 IPR027417 -
Mibi08g0853 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 601 826 IPR027417 -
Mibi08g0853 1490 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 211 1479 - -
Mibi08g0853 1490 Pfam ABC transporter 1263 1411 IPR003439 GO:0005524
Mibi08g0853 1490 Gene3D ABC transporter type 1, transmembrane domain 892 1227 IPR036640 GO:0005524|GO:0016020
Mibi08g0853 1490 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 930 1209 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0853 1490 FunFam ABC transporter C family member 5 891 1227 - -
Mibi08g0853 1490 SMART AAA_5 631 804 IPR003593 -
Mibi08g0853 1490 SMART AAA_5 1272 1464 IPR003593 -
Mibi08g0853 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1235 1479 IPR027417 -
Mibi08g0853 1490 SUPERFAMILY ABC transporter transmembrane region 279 581 IPR036640 GO:0005524|GO:0016020
Mibi08g0853 1490 Pfam ABC transporter transmembrane region 930 1189 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0853 1490 Pfam ABC transporter transmembrane region 293 555 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0853 1490 CDD ABC_6TM_ABCC_D1 291 578 IPR044746 GO:0140359
Mibi08g0853 1490 Gene3D ABC transporter type 1, transmembrane domain 268 583 IPR036640 GO:0005524|GO:0016020
Mibi08g0853 1490 CDD ABCC_MRP_domain2 1244 1464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0853 Mibi-ChrMibi08 19681554 19690157 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0853 604 853 Calmodulin-binding Proteins AT2G36910 30.741 1.66e-26 116