Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0849 ATGATGCCTATGATAGTTTGCTATAAATTTGAAAATTTATGTAACCCATGCAAGACTTTTAAAGTGATCCACCATAATCTCCACCAAATGGAGCTTCTTGATTCCTTAGAAATGGAAATGCCCCAAGAAACCAGCTTTTTCCTCCAACCCTTTTTCACTCATGGGCTTTCTTGCTCACTGCACCTGGCTTTGCTTCTTGTGTTACTGATAACTTGGGCATGTCAGAAAGCCAAGGTAGACCAAAGAGAAACTGCAAGAATAGGAGTTTCCAATACTGGTGTTTTGTACTACAGAAGGACTCTTTTATGTTGTTTAGTTGTTTGTGCTTTTAACCTTGTGTTGTCCTTACTGAACTTCTTTTACTGCTACAAGAGTGATAGCTATGATGAGACTGTTATTACTGTGGATTTTGTGATGAAAACTATTGCCTGGGGTGTTCTTTGTGTCTATTTGTATTTTAGACTATCCAGTTCAGGGGAACTTGACTATCCCAGATTCTTGAGAATTTGGTTCTGGGCTTACTCCTTTGTTTTCTGTTCTTTCCTTGTAATAGACTTTGTGTTATACAGAAAACACGTTTTCCTCCCAATAGTATACCTTGTTTCTGATATTGGTTCCACGCTCTCTGGTCTGTTTCTCTGTTATGTGGGATATTCAGTGAGAAATGAGGCAAAAGGGGCCCTTCTTGAAGAACCCCTTTTGAGTAGTGATTCTAGGGAAAGCAGCAGCTATGAGTCCTATAGGTACACCCCCTATTCAAAAGCTGGATTTTTCAGTATTGTCACTTTCTCATGGATGAGTCCTCTAATTGCTCTTGGAAATAAGAAGACTTTAGGCCTTGAGGACCTCCCTTTGCTCTCTGGCCATGACAGTGCATATGGGACATTTCCAACCTTTAGAAACAACCTTGAATCAGTGTGTGGTGATGATCTTAGCAGAGTGACTACTCTTAAACTGGCGAAGGCTTTATTCTTCTCAACATGGTATGGAATCCTTTTATCAGCTATATTTGTTTTCTTATTCACATGTGCTTCTTATGTTGGTCCCTTTCTGATTGACACCTTAGTTGAATATCTAAATGGACAAGAAAGCTTTAAAAATGAGGGTTATGTTTTGGCAATGGCATTTTTCGGTGGAAAGCTTGTGGAATGCCTTTCACGGAGGCACCGGATGTTCAGGTACCAACAAGTTGGGGTTAGATTTCAATCAATGTTGGTGGCAATGATATACGCGAAAGGATTGACCCTTTCATGTCAGTCAAAGGAGGGTCGTACTAGTGGGGAAATAATCAACTTAATGACTGTTGATGCTGCAAGGGTTGGTGAGTTTTGTTGGTACATGCATGATCCATGGATGGCTGTTCTGCAAGTAACTTTAGCTTTAATTATTCTATATAGAAGTGTTGGGATTGCTTCATTGTCTGCTTTTGCTGCTACTGTTATAATGATGTTGGCAAATTTACCATTGGGGTCACTGCAAGAGAAGTTTCAGAGGAAGTTAATGGAGTCAAAAGACACAAGGATGAAAGTCACCTCTGAGATTCTAAAGAACATGAGGATTCTAAAGCTGCAAGCATGGGAGATGAAGTTTCTGTCGAGAGTTATTGATATTAGGAACACTGAGACAGGATGGCTAAAGAAATTTTTATTCAGTTCAGGAATGACAACATTCCTCTTCTCTTCTGCCCCAACTTTCATTGCTATGGTTACTTTTGGTACTTGTATTCTCATAGGAATTCCACTTGACTCAGGTAAGATCTTAGCTGCATTGGCCACTTTCAGAATTCTGCAGCAGCCTATATATGACCTTCCTGACACAATCTCAATGATAGCGCAAACTAAGGTTTCCCTTGACCGGATCGCATCATTCCTTTGTCTTGAGGAATTACAGCATGATGTTGTAGAGAGGCTTCCTCAGGGTAGTTCCGATTCGGCGATTGAGATAATAGATGGGAATTTCACTTGGGGTTCATCTTCACCTATTCCTACATTGCAAAATATAAACATCAACATAGTCCATGGCTTCACGGTTGCTATTTGTGGTACTGTTGGTTCAGGAAAGTCAAGTTTACTCTCTTGTATACTTGGAGAAGTATCAAAGCTTTCTGGGACAGTGAAGGTGTGTGGGACAAAGGCCTATGTTGCTCAGTCCCCATGGATACAAGGGGGAAAGATAGAAGAGAATATACTATTTGGTAAAGAGATGGATAGGGAAAAATATGAGAAGGTTCTAGAAGCATGTTCGTTGAAAAGAGATCTAGAAATTCTTCCCTTTGGTGATCAAACTGTAATTGGAGAGAGAGGTATCAATTTGAGTGGTGGACAGAAGCAAAGGGTACAAATAGCTCGTGCTCTATACCAAGATGCTGATATATATCTTCTCGATGATCCTTTCAGTGCCGTGGATGCTCACACAGGATCCCACCTCTTTAAGGAGTGTTTGCTTGGCATTTTGAGTTCAAAAACAGTGTTATATGTGACTCATCAGATAGAGTTCTTACCCGATGCTGATCTAATATTGGTCATGAGAGATGGAAAGATAACTCAAGCAGGGATGTACAATGACATACTCAACTCAGGCACTGATTTTATGGAGCTTGTAGGTGCACATAGAGAAGCCTTATCTTCAATCAAAATGTTAGAGAAAAACCCCACCTTTAAAGGAATTAATACCACTGTGAATGAGACAGACTCATCAAGTGAATTTGAACTTGAGGAAAAAGTTGAAAACAAAAATGTTCAAGAAGAAGATGATAAAGGTGGGCCAAAAGGCCAGCTTGTTCAAGAGGAAGAAAGAGAAAAGGGCAAAGTTGGGTTTGATGTTTACTGGAAATACATCACAACAGCATATGGAGGAGCTCTTGTACCCTTCATATTATTCTTGCATGTGCTTTTTCAGGTTTTTCAAATTGGAAGCAATTATTGGATGGCTTGGGCAGCTCCTGTATCAGAAACATCTGAGCCTCCTGTTGGGAGCTTTACACTTCTGCTTGTCTATGTTGTTTTGGCCATTGGAAGTTCTTTCTGCAACCTTGCTAGAACAATGCTTATGTTTGTAGCTGGATATAAAACAGCCACAACACTCTTCAATAAATTGCATATGTGCTTCTTCCGAGCCCCTATATCATTTTTTGATTCTAAGCCAAGTGGACGAATCCTAAACAGAGCTTCCACAGACCAAAGTGCAATAGATATGAGCATTCCAATTTTAGTAGCAGGAGTTGCCTTCTATCTTATAGAGCTCTTGGGAAATATTGCTGTCATGTCTCTAATTGCTTGGCAGGTTTTTTTAGTATTTATTCCTGTGGTTGCAGCTTGCATATGGTACCAGCGATATTACTCAGAATCAGCAAGAGAATTATCCCGTTTGGTTGGTACTTGTGAAGCTCCAGTTATACAGCATTTTTCTGAGACCATTTCTGGATCAATGACCATCAGAAGTTTTGACCAAGAAGCAAGATTTCAGGACACAAACATGAAACTGATAGACAGATATTCCAAGCCCAAGTTATACACCCTCACTGCAATGGAATGGCTATGCTTCCGATTGGATATATTATCTTCTATCACATTTGCCTTCGGTTTGGTTTTCTTGATATCTTTTCCAAGTACTATCAGCGCTCCTGGCATTGCCGGCTTGGCTGTGACATATGGGTTTAATCTAAACATGCTGCAAGCTGCATTAATTCGGGCGCTTTGCCATATGGAGAACAAAATTATATCAGTAGAAAGAATATTTCAGTATACTAACATCCCAAGTGAGCCTCCTCTAGTTATAGAAGAAAACAGACCAGATTGTTCATGGCCATCATCTGGGGAGGTTCTTATCCAGAATTTACAGGTTCGATATGCTCCTCACTTGCCTCTTGTGTTGAGAGGTCTTACATGCACATTCAATGCTGGAGGAAAAACAGGCATTGTAGGGAGAACTGGGAGTGGAAAATCAACTCTGGTTCAAACACTGTTCAGGCTTATTGAACCTACATCTGGCCATATACTAATAGATGGCATCAGTATCTCTTCGATTGGGCTTCATGATTTAAGGTCTAGACTTAGCATTATCCCTCAAGATCCAACTATGTTTCAAGGGACCGTAAGAAGTAATCTAGACCCACTTGAAGAGTACACTGATGAACAGATTTGGGAGGCTCTGGATATGTGCCAACTTGGAGATGAAGTCAGGAAGAAGGAAGGAAAGCTTGATTCTACTGTTACTGAGAATGGAGAAAATTGGAGTATGGGTCAGAGGCAACTGGTCTGCCTCGGCAGAGTTCTACTCAAAAACAGCAAGATTTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACTGCTACAGATAACATCATTCAACAAACCTTGAAGCAGCATTTCTCAGAATGTACAGTTATAACCATTGCACACAGAATAACTTCTATTCTTGATAGTGACATGGTTTTGGTGCTGAGCCAAGGGCTTATTGAGGAATATGATTCACCAAAAAGATTGCTGAAGAACAAATCTTCATCTCTTGCTCAACTAGTTGCAGAATACACTCGCAGGTCTAACTCAGGTTTTGAAACTTAG 4563 0.4028 MMPMIVCYKFENLCNPCKTFKVIHHNLHQMELLDSLEMEMPQETSFFLQPFFTHGLSCSLHLALLLVLLITWACQKAKVDQRETARIGVSNTGVLYYRRTLLCCLVVCAFNLVLSLLNFFYCYKSDSYDETVITVDFVMKTIAWGVLCVYLYFRLSSSGELDYPRFLRIWFWAYSFVFCSFLVIDFVLYRKHVFLPIVYLVSDIGSTLSGLFLCYVGYSVRNEAKGALLEEPLLSSDSRESSSYESYRYTPYSKAGFFSIVTFSWMSPLIALGNKKTLGLEDLPLLSGHDSAYGTFPTFRNNLESVCGDDLSRVTTLKLAKALFFSTWYGILLSAIFVFLFTCASYVGPFLIDTLVEYLNGQESFKNEGYVLAMAFFGGKLVECLSRRHRMFRYQQVGVRFQSMLVAMIYAKGLTLSCQSKEGRTSGEIINLMTVDAARVGEFCWYMHDPWMAVLQVTLALIILYRSVGIASLSAFAATVIMMLANLPLGSLQEKFQRKLMESKDTRMKVTSEILKNMRILKLQAWEMKFLSRVIDIRNTETGWLKKFLFSSGMTTFLFSSAPTFIAMVTFGTCILIGIPLDSGKILAALATFRILQQPIYDLPDTISMIAQTKVSLDRIASFLCLEELQHDVVERLPQGSSDSAIEIIDGNFTWGSSSPIPTLQNININIVHGFTVAICGTVGSGKSSLLSCILGEVSKLSGTVKVCGTKAYVAQSPWIQGGKIEENILFGKEMDREKYEKVLEACSLKRDLEILPFGDQTVIGERGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGILSSKTVLYVTHQIEFLPDADLILVMRDGKITQAGMYNDILNSGTDFMELVGAHREALSSIKMLEKNPTFKGINTTVNETDSSSEFELEEKVENKNVQEEDDKGGPKGQLVQEEEREKGKVGFDVYWKYITTAYGGALVPFILFLHVLFQVFQIGSNYWMAWAAPVSETSEPPVGSFTLLLVYVVLAIGSSFCNLARTMLMFVAGYKTATTLFNKLHMCFFRAPISFFDSKPSGRILNRASTDQSAIDMSIPILVAGVAFYLIELLGNIAVMSLIAWQVFLVFIPVVAACIWYQRYYSESARELSRLVGTCEAPVIQHFSETISGSMTIRSFDQEARFQDTNMKLIDRYSKPKLYTLTAMEWLCFRLDILSSITFAFGLVFLISFPSTISAPGIAGLAVTYGFNLNMLQAALIRALCHMENKIISVERIFQYTNIPSEPPLVIEENRPDCSWPSSGEVLIQNLQVRYAPHLPLVLRGLTCTFNAGGKTGIVGRTGSGKSTLVQTLFRLIEPTSGHILIDGISISSIGLHDLRSRLSIIPQDPTMFQGTVRSNLDPLEEYTDEQIWEALDMCQLGDEVRKKEGKLDSTVTENGENWSMGQRQLVCLGRVLLKNSKILVLDEATASVDTATDNIIQQTLKQHFSECTVITIAHRITSILDSDMVLVLSQGLIEEYDSPKRLLKNKSSSLAQLVAEYTRRSNSGFET 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0849 1520 MobiDBLite consensus disorder prediction 897 929 - -
Mibi08g0849 1520 Gene3D - 1257 1510 IPR027417 -
Mibi08g0849 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 957 1237 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0849 1520 Gene3D - 628 887 IPR027417 -
Mibi08g0849 1520 FunFam ABC transporter C family member 3 1257 1509 - -
Mibi08g0849 1520 MobiDBLite consensus disorder prediction 900 929 - -
Mibi08g0849 1520 ProSitePatterns ABC transporters family signature. 771 785 IPR017871 GO:0005524|GO:0016887
Mibi08g0849 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 332 612 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0849 1520 CDD ABCC_MRP_domain2 1272 1492 - -
Mibi08g0849 1520 Pfam ABC transporter 1291 1439 IPR003439 GO:0005524
Mibi08g0849 1520 SMART AAA_5 1300 1485 IPR003593 -
Mibi08g0849 1520 SMART AAA_5 673 846 IPR003593 -
Mibi08g0849 1520 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 252 1509 - -
Mibi08g0849 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1276 1508 IPR003439 GO:0005524
Mibi08g0849 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 646 869 IPR003439 GO:0005524
Mibi08g0849 1520 CDD ABC_6TM_ABCC_D1 333 620 IPR044746 GO:0140359
Mibi08g0849 1520 FunFam ABC transporter C family member 5 631 878 - -
Mibi08g0849 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1266 1500 IPR027417 -
Mibi08g0849 1520 SUPERFAMILY ABC transporter transmembrane region 955 1256 IPR036640 GO:0005524|GO:0016020
Mibi08g0849 1520 SUPERFAMILY ABC transporter transmembrane region 324 627 IPR036640 GO:0005524|GO:0016020
Mibi08g0849 1520 FunFam ABC transporter C family member 5 918 1255 - -
Mibi08g0849 1520 CDD ABCC_MRP_domain1 646 846 - -
Mibi08g0849 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 643 868 IPR027417 -
Mibi08g0849 1520 Pfam ABC transporter 664 798 IPR003439 GO:0005524
Mibi08g0849 1520 FunFam ABC transporter C family member 10 315 628 - -
Mibi08g0849 1520 Pfam ABC transporter transmembrane region 959 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0849 1520 Pfam ABC transporter transmembrane region 332 599 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0849 1520 CDD ABC_6TM_ABCC_D2 955 1249 IPR044726 GO:0140359
Mibi08g0849 1520 Gene3D ABC transporter type 1, transmembrane domain 919 1255 IPR036640 GO:0005524|GO:0016020
Mibi08g0849 1520 Gene3D ABC transporter type 1, transmembrane domain 311 627 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0849 Mibi-ChrMibi08 19615078 19622872 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0849 646 885 Calmodulin-binding Proteins AT2G36910 29.615 5.25e-28 121