Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0841 ATGAATCACTCGGACATTGAAAATATTGATGAAACTAATATAAATTGGGAACAAGCTCTGAGTCAGTATGAAATGGGGATGTGCTCGGAGACTAATACTACACAAATAGAAGCCATAATGAAGCTAGCTCGTCTCTCTAAACATGCCCCTGAGAGTTTATTAGTTCGCATCATACCCCATCTCATTGAGAATCTCGAAGACTACCATTCAATTCATTCAGGTTATTCTCTTCAAAAGGCTTCTGCCTATTGCTTAAAATGTATAGCTTGTAGAGGTGATGGTGGGTTGGCAAAGGAAGTGGGTACACGTGGTGCAGCAAATTCTTTGTTATGGTGGTTGTCACATTCTAATGGGCTGTTTCAAGAAGTCCTGATAAAGTGTTTGCTTCTTGTTGTTACTTTTTGTAATTCGAGTCGTGCAATTGTCGCTAGTAATGGCGGCCTAGAAGTTATCATCAGTTTGTTAAATTCTTGTACAGGTGATATTAGACTGTACCTGTTGGAAATTTTGAGTGCATTGGCATTGCTAAGGGATGTTAGGAGGGCCCTCACTAGATTGGGAAATCTTAAATTTCTTGTGGAGGCTGCTAGCTGTGGTAGCATGGTATCTAGGGAAAGAGCTTGTCAATCAATTGGGTTACTTGGTGTCCCAAGACGGGCTAGGCGTACACTAGTTGAACTAGGAGTGATTCCAGTACTAGTTGAGTGTCTTCGTGATGGAGATCACACCATGAAACTTGTGGCTGGTAATGCCCTTGGTGTGATTTCTGCTCATATTGATTACATTAGATTAGTTGCTCAATCTGGGGTTATTGGTCTCTATGCTGAGCTTCTTCAAGGACATGACCCTTCTGGTAAGGAGATTGCTGAGGATGTATTTTGTATATTGGCTGTTGCTGAGGAGAATGCTGTTGAAATCACCAGACACTTGGCGAGAATTCTTCGAGAAGGTGACGATGAATCAAAGGCATCTGCTGCTGATGTATTATGGGATCTGGTGAGTTACAAGCACGCAACATCTATGATCCGGGAATCAGGTGTGATTCCAATTCTGGTTGAGCTTCTACCAAGTAGAAATGAAGAGATAAAGCAGAATGTTTCTGGGGCGTGTGCCCAACTGAGTTATGATGAGGCAGATAGAATGGCACTTGCTGAAGAAGGGGCAATCCCAATTCTGATTGAAATGATGCTGCATGATGAATCGGAGGAATTAAGGGATAATGCAGCTGAGGCTCTTGTCAACTTTGCTGAAGATCCTTTGTACCATGATAGAGTATCTGATGCAATAAGTGTTCCTTCATTTAGAGATATGCAGAACAGATTACTTCACATTCGTGCTTCAAATGAGCATATGGCTAGTTCGTTACGGAGGATGACTGATTGGCAGCTCACTTGGAATCCTGATCTTATTTAA 1413 0.419 MNHSDIENIDETNINWEQALSQYEMGMCSETNTTQIEAIMKLARLSKHAPESLLVRIIPHLIENLEDYHSIHSGYSLQKASAYCLKCIACRGDGGLAKEVGTRGAANSLLWWLSHSNGLFQEVLIKCLLLVVTFCNSSRAIVASNGGLEVIISLLNSCTGDIRLYLLEILSALALLRDVRRALTRLGNLKFLVEAASCGSMVSRERACQSIGLLGVPRRARRTLVELGVIPVLVECLRDGDHTMKLVAGNALGVISAHIDYIRLVAQSGVIGLYAELLQGHDPSGKEIAEDVFCILAVAEENAVEITRHLARILREGDDESKASAADVLWDLVSYKHATSMIRESGVIPILVELLPSRNEEIKQNVSGACAQLSYDEADRMALAEEGAIPILIEMMLHDESEELRDNAAEALVNFAEDPLYHDRVSDAISVPSFRDMQNRLLHIRASNEHMASSLRRMTDWQLTWNPDLI 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0841 470 Pfam HEAT repeats 309 412 - -
Mibi08g0841 470 Coils Coil 296 316 - -
Mibi08g0841 470 Gene3D - 10 308 IPR011989 -
Mibi08g0841 470 SMART arm_5 291 334 IPR000225 GO:0005515
Mibi08g0841 470 SMART arm_5 217 257 IPR000225 GO:0005515
Mibi08g0841 470 SMART arm_5 135 175 IPR000225 GO:0005515
Mibi08g0841 470 SMART arm_5 335 375 IPR000225 GO:0005515
Mibi08g0841 470 SMART arm_5 376 417 IPR000225 GO:0005515
Mibi08g0841 470 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4 310 427 - -
Mibi08g0841 470 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 346 388 IPR000225 GO:0005515
Mibi08g0841 470 Pfam Armadillo/beta-catenin-like repeat 221 257 IPR000225 GO:0005515
Mibi08g0841 470 Gene3D - 309 453 IPR011989 -
Mibi08g0841 470 SUPERFAMILY ARM repeat 142 422 IPR016024 -
Mibi08g0841 470 SUPERFAMILY ARM repeat 34 155 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0841 221 432 U-box Gene Family AT2G23140 26.484 6.78e-09 56.2