Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0837 ATGGAGCCTTCGGATTACGATGACGTGGCATTCGACGATCTGAATCATCAGTTCAGGTCTCACCAGAATTCTGCCAGTGGAGGAGGCGCAAGGTACAAGCTCATGTCGCCTGCCAAGCTTCCGATCTCAAGGTCGCCCTGTATTACCATACCTCCTGGCCTCAGTCCCACCTCCTTTCTTGACTCCCCTGTGCTTTTGTCCAACATGAAGGTGGAGCCCTCTCCAACAACAGGGTCCCTCACTAAGCCTCAAGCAGTGTATGGTTCTGTTTCTTCTGCAACATTTCCTGTGACGACTATATGCTCAAATTCCAATACTGTTGAAGACAGAAAATCTGGCTTCTTTGAGTTCAAACCACGCAGTAGTGCAGATATGGTTCCTGCTGATTTTAACAACCATGTAATAAGTGAACAGTCCAGGCAAATAGATGGTCCAGGCCTTGTTCAATCATATGCCTCATCAACATTAGTTAAGTCTGAGACAGCAATGCCATCAAATAAATTGAGTCTATCATCGACTGTTCAAATGGTTAGTTCAGGTACTAGTGCTCCTATTGAAGTTGATCAGGATAAACTTAACCAGAAAGGCTGTGCCGCCCCTGGGCCTCAGGCATCTTTAGGTGATGGTAGAGGCAATAGCCTTCCAATTGCAGCTGAGAGAATATCAGATGATGGATACAATTGGCGAAAATATGGCCAGAAACATGTTAAGGGATGTGAATTTCCCCGCAGCTACTACAAATGCACACACCCCAATTGTGAAGTAAAAAAGTTATTTGAACGCTCTCATGATGGGCAAATAACAGAGATAATTTATAAGGGAAAACATGATCATCCTAAACCTCAACCAAGCCGTCGATACTCTGCTGGTACTATGATGTCTATACAAGAAGAGAAAACTGACAAGGCTTTGTTAGCCAGCCAAGATGACAAATCCAATATGCATGCTCTGGTGCCTCACATGGCTGAACCCAACAGTAACCCAGATCAATCCCCTGTACCTGCTGATAGTCCAGAGGGTGTTGGGTTAGTGTCAAATAGGGTTAATGATGATATTGATGATGATGATGATTCCTTCTCCAAGAGAAGCAAAATGGAAGTTGGAAATGCTGACCTTACTCCTATAGTTAAGCCAATCCGGGAACCGCGGGTTGTTGTACAAACACTAAGTGAGGTTGACATATTGGATGATGGTTATCGCTGGCGTAAGTATGGGCAAAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGTTGGTTGCCCGGTTAGAAAACATGTGGAGAGGGCATCTCATGATCCCAAAGCAGTAATAACCACATATGAGGGTAAGCACAATCATGATGTGCCTACTGCGAGGAGCACTAGCCATGACACAGCAGGCCCAACAGTTACTGCTGGCGGGCAGACAAGAATTAGACCAGAAGAAAGTGATACTATTAGCCTTGACCTTGGGATGGGCATTAGATCAGCTGCTGAAAATATGCCTAATAGACCAGGGCAATTGCTGCTCTCTGAATATGGTAGTGGTCAAACTCACTCCAACCATTCCAGTCTGAAATTTGGCCATAATACCCCTGCTCCAGCATACTTCAGTGTTATTAATAACGGCTCGAATCCATATGGTTCTAGAGAAAATCTGAGTGATGGTCCATCTTTGAACCATTCTTCTTATCCATGCCCTCCGAACATTGGAAGAATACTAACTGGTCCATGA 1731 0.4466 MEPSDYDDVAFDDLNHQFRSHQNSASGGGARYKLMSPAKLPISRSPCITIPPGLSPTSFLDSPVLLSNMKVEPSPTTGSLTKPQAVYGSVSSATFPVTTICSNSNTVEDRKSGFFEFKPRSSADMVPADFNNHVISEQSRQIDGPGLVQSYASSTLVKSETAMPSNKLSLSSTVQMVSSGTSAPIEVDQDKLNQKGCAAPGPQASLGDGRGNSLPIAAERISDDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGKHDHPKPQPSRRYSAGTMMSIQEEKTDKALLASQDDKSNMHALVPHMAEPNSNPDQSPVPADSPEGVGLVSNRVNDDIDDDDDSFSKRSKMEVGNADLTPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSTSHDTAGPTVTAGGQTRIRPEESDTISLDLGMGIRSAAENMPNRPGQLLLSEYGSGQTHSNHSSLKFGHNTPAPAYFSVINNGSNPYGSRENLSDGPSLNHSSYPCPPNIGRILTGP 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0837 576 ProSiteProfiles WRKY domain profile. 217 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0837 576 FunFam WRKY transcription factor 212 282 - -
Mibi08g0837 576 SUPERFAMILY WRKY DNA-binding domain 220 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g0837 576 MobiDBLite consensus disorder prediction 546 564 - -
Mibi08g0837 576 SUPERFAMILY WRKY DNA-binding domain 387 455 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g0837 576 Gene3D WRKY domain 382 448 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g0837 576 ProSiteProfiles WRKY domain profile. 390 455 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0837 576 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 484 IPR044810 GO:0003700
Mibi08g0837 576 FunFam WRKY transcription factor 33 382 448 - -
Mibi08g0837 576 MobiDBLite consensus disorder prediction 451 475 - -
Mibi08g0837 576 SMART WRKY_cls 222 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0837 576 SMART WRKY_cls 395 454 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0837 576 MobiDBLite consensus disorder prediction 458 475 - -
Mibi08g0837 576 Gene3D WRKY domain 216 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g0837 576 MobiDBLite consensus disorder prediction 546 576 - -
Mibi08g0837 576 MobiDBLite consensus disorder prediction 319 361 - -
Mibi08g0837 576 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0837 576 Pfam WRKY DNA -binding domain 396 452 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0837 Mibi-ChrMibi08 19334786 19340455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0837 35 576 WRKY Transcription Factor Family AT4G26640 54.414 1.53e-178 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi08g0837 WRKY 3.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g0837 08 19334786 19340455 Mibi08g0837 08 19334786 19340455 ECH