Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0831 ATGGGTAACTGCTGCTTCTCCAAGGAATCCTCTGTTTATAGAGTGTCCTCCAATGCTAAGTCAGACTCGTCCAAGGACCAAAGTCACGCCATTAGACCGAGGAATGATGATAGTAATAAGTTACCATCCAACCCTGAAGAAGTAGAAGTCCTACGTCGTGATTCGGCTGCAAAGCCTTTGGTTGCCTTCACGTACGATGAACTAAAGGTAATCACTGGAAATTTTAGGCATGATCGTCTTTTGGGTGGAGGAGGATTCGGAAGGGTTTACAAGGGTTTTATTTCTGAGGACGTCAGAGAGAGCCTTCCTCCACTAACTGTTGCTGTCAAGGTACATGATGGCGACAATAGTCATCAAGGTCACAGAGAATGGCTGGCGGAAGTCATATTTCTCGGCCAGCTTTCTCATCCAAATTTGGTCCAATTGATTGGATATTGTTGCGAAGACGAACATCGAGTGCTCATATATGAGTACATGGCCCGAGGAAGTGTGGAAAATAATCTCTTTTCCCGAGTATTGCTACCCCTGCCATGGTCCATAAGAATGAAGATAGCATTTGGCGCTGCTAAGGGACTTGCATTTCTTCATGAAGCAGAGAAGCCCGTTATCTATCGTGACTTTAAGACATCAAATATATTATTGGACCTGGACTACAATGCAAAACTTTCAGACTTTGGCCTTGCTAAGGATGGACCTGTCGGTGATAAATCTCACGTCTCTACCCGCATAATAGGAACTTATGGATATGCTGCACCTGAATATGTATTGACTGGTCATCTGACCCCTAGAAGTGATGTGTATAGTTTTGGCGTTGTTCTTCTTGAACTTCTGACTGGAAGAAAATCTCTAGATAAGTCACGGCCTGCTCGGGAGCAGAACCTTGCAGATTGGGCTCTTCCCTTGCTGAAGGAAAAGAGGAAATTGTTGAATATAATTGATCCAAGACTGGATGGTGAGTATCCTATAAAAGGGGTTCACAAGGCTGCCATGCTAGCTTATCATTGCTTGAACCGCAATCCAAAAGCAAGGCCTTTAATGCGAGATATAGTAGATTCATTGGAGCCTTTGCAACTTCAAAATGAGGTTTCAATTGGAAAAACATTTACCATTATCAGTGAAGTTCCTTAA 1128 0.4335 MGNCCFSKESSVYRVSSNAKSDSSKDQSHAIRPRNDDSNKLPSNPEEVEVLRRDSAAKPLVAFTYDELKVITGNFRHDRLLGGGGFGRVYKGFISEDVRESLPPLTVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVQLIGYCCEDEHRVLIYEYMARGSVENNLFSRVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIIGTYGYAAPEYVLTGHLTPRSDVYSFGVVLLELLTGRKSLDKSRPAREQNLADWALPLLKEKRKLLNIIDPRLDGEYPIKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQLQNEVSIGKTFTIISEVP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0831 375 SUPERFAMILY Protein kinase-like (PK-like) 50 353 IPR011009 -
Mibi08g0831 375 Gene3D Transferase(Phosphotransferase) domain 1 159 369 - -
Mibi08g0831 375 ProSiteProfiles Protein kinase domain profile. 75 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0831 375 FunFam Probable serine/threonine-protein kinase PBL8 159 371 - -
Mibi08g0831 375 MobiDBLite consensus disorder prediction 25 44 - -
Mibi08g0831 375 MobiDBLite consensus disorder prediction 1 24 - -
Mibi08g0831 375 Pfam Protein tyrosine and serine/threonine kinase 78 353 IPR001245 GO:0004672|GO:0006468
Mibi08g0831 375 Gene3D Phosphorylase Kinase; domain 1 37 158 - -
Mibi08g0831 375 MobiDBLite consensus disorder prediction 1 44 - -
Mibi08g0831 375 FunFam Serine/threonine-protein kinase BIK1 42 158 - -
Mibi08g0831 375 ProSitePatterns Protein kinases ATP-binding region signature. 81 110 IPR017441 GO:0005524
Mibi08g0831 375 PANTHER OS01G0588500 PROTEIN-RELATED 28 357 - -
Mibi08g0831 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0831 Mibi-ChrMibi08 19163729 19168571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0831 26 353 Glycoside Hydrolase AT3G07070 49.398 2.93e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi08g0831 PK_Tyr_Ser-Thr 4.8e-44 CL0016