Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0822 ATGCCTGACCAAGAAATTTGCAGTTCAATAATGAAGGAATCTCGTCTTGTAGTAAGGAAATTCTTGGCCAGGCCTCAACGTGAAGGAGTTGGTGCTGTTGTTAGAAGAAGTATCGGACGGTTTGAACTCAAGTACTTTGATCCTTTTCTGGTGTTAGATGAATTCTCAGTTTCTGCTCCATCTGGCTTCCCTGATCATCCACATAGAGGGTTTGAGACAGTCACATATATGTTGCAGGGAGCTATAACACATGAGGATTTTGAAGGGCACAAAGGAACTATTGAAGCAGGTGACTTGCAATGGATGACTGCAGGGAGAGGGATAGTTCACTCAGAGATGCCTGCTGCTCATGGCATTCAAAAAGGTCTTCAACTTTGGATCAATCTTACTTCCAATGATAAAATGATTGAGCCAAGGTATCAAGAGATGTTAAGCAAGGACATAGCAGAAGTAGAGGAAGATGGAATAAAAGTAAGGGTTATAGCAGGAGAAGCCTTAGGAACGAAGTCACCAATCCAAACAAGGACTCCAACAATGTACTTGGATTTCTCTCTCAAACCTGGGGCCCACTTGCAGCAACCCATACCAAAGTCATGGAATGCCTTTGCATATGTTTTGGAAGGAGAAGGTGTGTTTGGGAACTTGAAATCTCAGCCTGTCTCTTCACACCATATTCTTCTTCTTGGGTCAGGTGATGGACTTGAGGTTTGGAACAAGTCATCTTCTAATAAGGTGCTTAGGTTTGTACTTGTTGGAGGACAACCATTGGGTGAATCTGTGGCTCAATTTGGACCCTTTGTGATGAACACTCAAGATGAGATTGACCAAACCATTGATGATTTTGAGAATTGTGTCAATGGGTTTGAGAAAGCTAGACATTGGAAGTCTGAGGCTGCAATTACTCTTGATATTTAG 915 0.424 MPDQEICSSIMKESRLVVRKFLARPQREGVGAVVRRSIGRFELKYFDPFLVLDEFSVSAPSGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAHGIQKGLQLWINLTSNDKMIEPRYQEMLSKDIAEVEEDGIKVRVIAGEALGTKSPIQTRTPTMYLDFSLKPGAHLQQPIPKSWNAFAYVLEGEGVFGNLKSQPVSSHHILLLGSGDGLEVWNKSSSNKVLRFVLVGGQPLGESVAQFGPFVMNTQDEIDQTIDDFENCVNGFEKARHWKSEAAITLDI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0822 304 Gene3D Jelly Rolls 149 256 IPR014710 -
Mibi08g0822 304 PIRSF Pirin 13 295 IPR012093 -
Mibi08g0822 304 PANTHER PIRIN-RELATED 10 298 IPR012093 -
Mibi08g0822 304 CDD cupin_pirin_C 177 255 - -
Mibi08g0822 304 CDD cupin_pirin_N 32 129 - -
Mibi08g0822 304 Pfam Pirin 34 127 IPR003829 -
Mibi08g0822 304 Gene3D Jelly Rolls 28 282 IPR014710 -
Mibi08g0822 304 SUPERFAMILY RmlC-like cupins 15 296 IPR011051 -
Mibi08g0822 304 FunFam pirin 28 165 - -
Mibi08g0822 304 Pfam Pirin C-terminal cupin domain 180 286 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0822 Mibi-ChrMibi08 18867930 18872577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0822 15 292 Calmodulin-binding Proteins AT3G59220 59.140 1.95e-126 360