Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0821 ATGGATCCTACCCTGTGTGTTAATGGATGCGGCTTTTTTGGCTCCCACGAAAACAAAAATATGTGCTCAAAGTGTTACAGAGATCATATTCTTGTCCTTAGTAAAAGTATCGTTGAATCATTACCCGATGATAACCAAACTTTGAAAATAAGTGAAACCAATAATATTATAGAGTCTACTCATGAAGAAACTTTGAGAATAAGTGAAGCCAATAATAGTGTTGAATCTACCAATGAAGAAACGGAGAATTCTAATTCTAACAAAGATGCATTGGAATCTCAAAAGAAGAATAGGTACAGGAGTTGCAACAAAAAGATTGGCATAACTGGGTTCAAGTGCAAATGTGGATATTTGTTTTGTGGAAAGCATCGATATCCTGAGGAACATACATGTGTTGCAAATTTCAAGCAGATTGGTCGTCAACTTCTTCACAAACAAAACCCACTTTGTGTGGCCGACAAATTAAATTACAAAATTTGA 480 0.3521 MDPTLCVNGCGFFGSHENKNMCSKCYRDHILVLSKSIVESLPDDNQTLKISETNNIIESTHEETLRISEANNSVESTNEETENSNSNKDALESQKKNRYRSCNKKIGITGFKCKCGYLFCGKHRYPEEHTCVANFKQIGRQLLHKQNPLCVADKLNYKI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0821 159 Pfam AN1-like Zinc finger 99 133 IPR000058 GO:0008270
Mibi08g0821 159 Gene3D - 68 153 IPR035896 -
Mibi08g0821 159 Coils Coil 74 94 - -
Mibi08g0821 159 MobiDBLite consensus disorder prediction 61 92 - -
Mibi08g0821 159 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Mibi08g0821 159 ProSiteProfiles Zinc finger AN1-type profile. 93 139 IPR000058 GO:0008270
Mibi08g0821 159 MobiDBLite consensus disorder prediction 61 84 - -
Mibi08g0821 159 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 156 - -
Mibi08g0821 159 SUPERFAMILY AN1-like Zinc finger 82 153 IPR035896 -
Mibi08g0821 159 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 34 - -
Mibi08g0821 159 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Mibi08g0821 159 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Mibi08g0821 159 SMART AN1_Zf_4 100 136 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0821 Mibi-ChrMibi08 18829354 18829833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0821 5 155 C2H2 Transcription Factor Family AT3G52800 37.255 2.37e-26 96.3