LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi08g0783	ATGGAAGCCCATTCTTCATCATCAACGACGGCGTTTCTTCAGCAGAAACGTCTCATCCGTGAAATGGATTTCTTCTCTAACAAGAAGACCAAGACTGATGACGATGATGATGATGATCATCATCATGATCTGATGCTAAACAGATCCACAGAGCTTCAACTTGATGCAGGTTTAGATCTTGGGACTAAGAGTAGCAGTAGCAATAGATCGACTGTGGATGATGGAGCATCAGACGCCATGGAAGAGAACAAGAATAAAGAGGCACACAATCAATTAGTTAATCTATTATCTGAATTGCAGCATTTGAAAGCTGAAAATCAATGTTTGAAAGAGTTGCTTGATCAGGTGAACGCTGATTATAATGCCTTGCAATTGAGACTTTTCAACCTCAAGCAAACCCAAAGTCATGAGGTAGGAGAAGCTGGAAATGGAGATACGATCGAGAGGGAAAGAGGAATGATGCTAGTAGGTTCATTACTTGAAAATAATAAAAGTGAAGGCAGCTCAGTGATGAGAGAAAGCAAAAACACTAATAATATGCTTGATTTGATTGAGTATTGCAAGAATGAGCATGACAGAGATAGTGATCATCATCAGCCACTAAATAACAATGAAGATATTATTCATAATAATAATCCAGATTATGGGAAAGATCATAATAATGATCATCATTCAAGAGATACTTCATCCGATACCATATCACTCGTAAGGAAAGCTCGTGTCTCAGTTCGAGCTATATCTGAGTCACCAATGGTTCAGAGGTGTGCTGAAGATAGAAGCATTTTGATAACTACATATGAAGGACAGCACAATCATCCACTTCCTCCAGCTGCAAAAGCTATGGCTTCCACAACAACCTCAGCTGCTTCTATGCTTCTTTCAGGATCACTTCAAAGTTCAGATCTTCACAATAACCTTATAAACCTTAATGTTTTAGAAAGTGCTTCAATATTTGCTTCCTCACACAACATGGCTACTCTCACAGCCTCAGCCCCATTTCCTACTATCACTTTGGACCTCACTCGTCACCAAACCCTACCATCTCCGCCTAAGATTTTCGGTCAGGCTCTGTGTGAGCAACACTTGACGATTCCTCAAGGGACGACGTTGTTCACGGAAACAGTGAATGCGGCAACCGCTGCTATTACTGCGGATCCCAATTTCACTGCAGCTCTTGTGGCTGCCATTACTTCAGTCATAGGGAGTTCCCATTCCAACACTAATAATGGTTCTGATATTACTGCTAGTGGGAATCCCTAG	1260	0.4103	MEAHSSSSTTAFLQQKRLIREMDFFSNKKTKTDDDDDDDHHHDLMLNRSTELQLDAGLDLGTKSSSSNRSTVDDGASDAMEENKNKEAHNQLVNLLSELQHLKAENQCLKELLDQVNADYNALQLRLFNLKQTQSHEVGEAGNGDTIERERGMMLVGSLLENNKSEGSSVMRESKNTNNMLDLIEYCKNEHDRDSDHHQPLNNNEDIIHNNNPDYGKDHNNDHHSRDTSSDTISLVRKARVSVRAISESPMVQRCAEDRSILITTYEGQHNHPLPPAAKAMASTTTSAASMLLSGSLQSSDLHNNLINLNVLESASIFASSHNMATLTASAPFPTITLDLTRHQTLPSPPKIFGQALCEQHLTIPQGTTLFTETVNAATAAITADPNFTAALVAAITSVIGSSHSNTNNGSDITASGNP	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi08g0783	419	Gene3D	WRKY domain	215	276	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mibi08g0783	419	MobiDBLite	consensus disorder prediction	191	233	-	-
	Mibi08g0783	419	ProSiteProfiles	WRKY domain profile.	252	275	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi08g0783	419	Coils	Coil	85	133	-	-
	Mibi08g0783	419	MobiDBLite	consensus disorder prediction	59	74	-	-
	Mibi08g0783	419	MobiDBLite	consensus disorder prediction	58	81	-	-
	Mibi08g0783	419	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	56	252	IPR044810	GO:0003700
	Mibi08g0783	419	MobiDBLite	consensus disorder prediction	211	233	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi08g0783	Mibi-ChrMibi08	17379660	17385352	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi08g0783	72	400	WRKY Transcription Factor Family	AT4G04450	34.988	2.33e-44	158