Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0746 ATGAAGAAGCCGAAAATCATTATGGCGTCATCGTCGAGCAGTGGATTGACATTCAAGCTACATCCCTTGGTGATAGTGAACATATCGGATCATTACACTAGAGTTAAGTCTCAGATGAACCCTCCCATTGCATCCAATCAGAGAAGCGCCAATTCTAATGCTTCTGACGGAACGGTTTCGCTGCCTCCTAGGGTGTACGGATGTGTGATAGGAGTACAGAGAGGACGCACTGTGGAGATCTTCAATAGCTTCGAACTTCTTTACGACCCTTCTACCCATTCCCTTGATCGCGCTTTTCTTGAGAAGAAGCAAGAGCTTTATAAGAAGGTTTTCCCTCATTTCTACATTTTGGGATGGTATTCAACTGGGAGCGATGCCCAGGAATCAGATATGCATATTCACAAAGCTTTGATGGATATCAATGAAAGTCCTGTGTATGTACTTCTGAATCCTTCAATCAATCATGCTCAGAAGGATCTCCCTGTCAGTATTTTTGAAAGTGAACTGCATGTAATTGATGGGATTCCACAACTGATCTTTGTTCGTTCAAGCTACACTATTGAGACTGTTGAAGCAGAACGGATTTCAGTTGATCATGTTGCGCATCTTAAGCCCTCAGACGGAGGTTCAGCCGCTACACAATTGGCTGCTCACCTTACTGGTATACACAGTGCTATTAAAATGCTGCATAGCAGAATTAAGGTGCTGCATCATCATCTTCTTGCAATGCAGAAAGGCGAAGTCCCTTGTGACAATTCTTTGCTAAGACAAGCATCAAGTCTCCTGAGAAGATTGCCGGCGATTGAATCCGAGAAATTCCAAGATGATTTCTTGATGGAATACAATGATACCTTATTAATCACCTACCTTGCTATGATGACTAACTGCTCAAGCACAATGAACGAACTGGTCGACAAATTCAATTCTACATACGACAGGCATAGCAGAAGGGGAGGGCGAACTGCTTTTATATGA 975 0.4297 MKKPKIIMASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPPIASNQRSANSNASDGTVSLPPRVYGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHHLLAMQKGEVPCDNSLLRQASSLLRRLPAIESEKFQDDFLMEYNDTLLITYLAMMTNCSSTMNELVDKFNSTYDRHSRRGGRTAFI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0746 324 SMART pad1_6 17 170 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi08g0746 324 CDD MPN_CSN6 16 320 IPR033859 GO:0000338|GO:0008180
Mibi08g0746 324 Gene3D Cytidine Deaminase, domain 2 4 205 - -
Mibi08g0746 324 ProSiteProfiles MPN domain profile. 38 171 IPR037518 -
Mibi08g0746 324 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 14 143 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi08g0746 324 FunFam COP9 signalosome subunit 6 8 205 - -
Mibi08g0746 324 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 8 315 - -
Mibi08g0746 324 Pfam Maintenance of mitochondrial structure and function 191 305 IPR024969 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0746 9 275 Eukaryotic Initiation Factors Gene Family AT2G39990 22.426 2.26e-09 55.8