Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0743 ATGGCTGGGATTGATGAAAATGTTCCTTTAACTGGCGACTGGGGTCTTCCTAGTCCAAGTCCAAGATCATTTTTCTCTAAAATACTAGCTGAAGATAATCTCACTAGACAAATCTCAGAGCCTCCGGGAAGTGGGAGAACTGAGGAGCCCTTTCTTCAACAAAATCAGCAGCTCATCATGACTGGCAATTTCAACACCAGTGATACTGCTCTTCAAGATGACACATCTGGTGGCCAATTAACTGATGCGATTTCTTTGTCAGAAAATAATTCTGGCTCACGAAGAAACCTTGGTGAAAGAATAGCCGCTAGAGCTGGATTTAATGCCCCAAGGTTGAATACCGAAAGCATTAGATCAGCTAATCCTACAATTAATCCGGATCCTCGATCGACTTGCTTAACCATACCTGCTGGCGTCAGTCCGACCACTCTTTTAGAGTCTCCAGTTTTCCTTTCCAATTCACTTGCACAACCGTCTCCAACAACTGGAAAGTTTCCATTTATCTCGAATGGCAACTTCCGGGGTTTTGAATCAAATTCTGGTGGTCTTGAAAATAGTAAAGATAACAACTATGTTGATTATGCACCACCATTTGATTTCAAGATTACGTCAGAGTTGGGCTCTATTTGTAATGGTGCTGCTAGAAAAATGATTCCAACCACCTCGCTGCCACAACAATACCTTACTCATACTGCTGAGGTCTCAGCTCCAGATTTGACTGACCCTCCCACTCAAATTGATAGTAAAGCATCAGTAGAGGAACCAGCCGATGAAGAGGGAGGTCAAAGAGGAAATGGAGATTCACAAGTTGCTGGTATTGGGGGTACACCATCTGAAGATGGATATAACTGGAGAAAGTATGGACAGAAACAGGTTAAAGGTAGTGAGTTTCCACGGAGTTACTACAAATGCACACACACAAATTGTCCAGTAAAGAAGAAAGTGGAACGATCTCATGAGGGGCACATAACAGAAATCATCTACAAGGGGCATCACAACCATCCGCAACCGCCTACAAATCGTAGGTCTGCAATAGGGTCTGCCCCTCCTCTTGGTGACATGCAAGTGGATGCATCTGAAAATACTGAACCACATGGTGTGGTTGATGGTGAACTGGGTTGGGCAAGCTCACAAAAAGGAAATATGGCTAGAAATACTGAATGGAAGCATGAGAACCTTGAAGTGACCTCTTCAGCAGCATCTGTGGTCCCTGAATTTGGAAACCAGTCCACCAATTTGCAAAATGGTGGTCAATTTGAGTCAGGAGATGCAGTGGATGGCTCATCTACTTTCTCTAACGATGAGGATGATGATGATAGAGGCACTCATGGCAGTGTGTCAGTAGGTTATGATGGAGAAGGAGATGAATCAGAGTCTAAAAGAAGAAAACTGGAATCTTATCCCAATACAGCAGAATTGAGTGGGGCCACTAGAGCTATTCGGGAACCTAGAGTAGTTGTTCAAACTACCAGTGAAGTAGATATCCTTGATGATGGATATCGTTGGCGTAAGTACGGACAAAAAGTTGTCAAAGGAAATCCCAATCCCAGGAGTTACTATAAATGCACCAATGTAGGTTGCACAGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTGAAATCTGTGATCACTACATATGAAGGAAAGCACAACCACGATGTTCCTGCAGCTCGCAATAGTAATCAAGGCAATGCTGCAGCTTCAAGTGCTGCTACTGCTCAAGCTTCTTCTGTTATTCATAGCCACAGAGCTGAAGTTTCTCAAGTTCACAACGGCATTGGGAGGCTTGAGAGGCCTATTTTGGGCCTGGGCCCGTTCAACTTACCTGGGGCCGGGCCTGGGCCTGGGAGGTCACAGTTAGGGCCTTCTCATGGCTTTTCCTTTGGAATTGGAATGAATCAATCGGGCTTCCCCAATCTAGCCGCCATGTCAGCTTTGGGCCCAGCCCATGCCAAGCTTCCTGCCATGCCTGTTCATTCATTCTTGCCCAATCAACGTCCACCAAACATGGGCTTCATGTTACCCAAAGCAGAACCCAATTTGGAGCCTGTTCCAGCTCCAGATCGCGGGCTAAATATGCCTGCTGGTTCGTCTTCAGTATATCAAGAAATGATGAGTCGGATGCCACTTGGACCTCATATGTAA 2148 0.4525 MAGIDENVPLTGDWGLPSPSPRSFFSKILAEDNLTRQISEPPGSGRTEEPFLQQNQQLIMTGNFNTSDTALQDDTSGGQLTDAISLSENNSGSRRNLGERIAARAGFNAPRLNTESIRSANPTINPDPRSTCLTIPAGVSPTTLLESPVFLSNSLAQPSPTTGKFPFISNGNFRGFESNSGGLENSKDNNYVDYAPPFDFKITSELGSICNGAARKMIPTTSLPQQYLTHTAEVSAPDLTDPPTQIDSKASVEEPADEEGGQRGNGDSQVAGIGGTPSEDGYNWRKYGQKQVKGSEFPRSYYKCTHTNCPVKKKVERSHEGHITEIIYKGHHNHPQPPTNRRSAIGSAPPLGDMQVDASENTEPHGVVDGELGWASSQKGNMARNTEWKHENLEVTSSAASVVPEFGNQSTNLQNGGQFESGDAVDGSSTFSNDEDDDDRGTHGSVSVGYDGEGDESESKRRKLESYPNTAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNVGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSNQGNAAASSAATAQASSVIHSHRAEVSQVHNGIGRLERPILGLGPFNLPGAGPGPGRSQLGPSHGFSFGIGMNQSGFPNLAAMSALGPAHAKLPAMPVHSFLPNQRPPNMGFMLPKAEPNLEPVPAPDRGLNMPAGSSSVYQEMMSRMPLGPHM 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0743 715 MobiDBLite consensus disorder prediction 330 381 - -
Mibi08g0743 715 SMART WRKY_cls 278 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0743 715 SMART WRKY_cls 496 555 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0743 715 MobiDBLite consensus disorder prediction 548 580 - -
Mibi08g0743 715 MobiDBLite consensus disorder prediction 407 429 - -
Mibi08g0743 715 Pfam WRKY DNA -binding domain 279 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0743 715 Pfam WRKY DNA -binding domain 497 553 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0743 715 MobiDBLite consensus disorder prediction 407 470 - -
Mibi08g0743 715 FunFam WRKY transcription factor 33 483 549 - -
Mibi08g0743 715 Gene3D WRKY domain 483 549 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g0743 715 ProSiteProfiles WRKY domain profile. 491 556 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0743 715 ProSiteProfiles WRKY domain profile. 279 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g0743 715 SUPERFAMILY WRKY DNA-binding domain 276 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g0743 715 Gene3D WRKY domain 273 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g0743 715 FunFam WRKY transcription factor 268 338 - -
Mibi08g0743 715 MobiDBLite consensus disorder prediction 556 580 - -
Mibi08g0743 715 MobiDBLite consensus disorder prediction 235 284 - -
Mibi08g0743 715 MobiDBLite consensus disorder prediction 453 467 - -
Mibi08g0743 715 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 145 574 IPR044810 GO:0003700
Mibi08g0743 715 SUPERFAMILY WRKY DNA-binding domain 488 556 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0743 Mibi-ChrMibi08 16078222 16082013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0743 1 710 WRKY Transcription Factor Family AT5G56270 46.684 1.49e-175 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi08g0743 WRKY 8.3e-24 CL0274