Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0734 ATGTCCGTACAGTCCCCTGTGGATGATGCAATATTATGCAGAGAAAATGGAAGAAGAAGAAGAAGAAGAAGAAGCCATCAAAAGCTCCTCAGAATCATATTCACCGACCACGACGCCACAGATTCCGACACCTGCAGCGATGAAGACGATGATGATGGTGATGAAGACAAACCTCAAGAATTACGAAGAGTACTCAAGAAGCATGTCACAGAGATCACTGTGAATCTTCCCACATCATCTCATCATCACTACCCAAATTCCTCTACTCCTCCTTCCCAAGACCGTACCATCATGAAGAGACCACCAAAGAAAACTCTGTCACACAGCTGCCACAACAAGTACCGGGGCGTTCGCCGGAGGCCGTGGGGCCGGTGGGCCTCAGAGATCCGAGACCCGACCCGTCGGAAAAGACTATGGCTGGGAACCTTCGACACGGCGGAGGAAGCCGCCACCGAGTACGACAAGGCTGCCGTCATGCTCAAGGGTGTTAACGCCGTCACGAACTTCCATAACACCGTCGTGCCGGAGAAGGACACTCCATTATTGGGCACCACCGATGGATTCGCCACGTCGTCGCCGACGTCGGTGCTGGCGTATGACAGCGGTTATTCCACGGCGGGGTTTGAAAGTTTTTGCTCCGGCGAGGTGGATGCGTTGGGTTTTGATATTGAGATGCCGTTGATGACGGACATGAACGTGGGGGTGGGCGTGGGGTTTGGAAAAAAGTGGTGGGAGAGTGAAGAATTGGAAGACTTTGACGTGGACGAGTTCTTGACGTGGCCTGACTAA 789 0.5272 MSVQSPVDDAILCRENGRRRRRRRSHQKLLRIIFTDHDATDSDTCSDEDDDDGDEDKPQELRRVLKKHVTEITVNLPTSSHHHYPNSSTPPSQDRTIMKRPPKKTLSHSCHNKYRGVRRRPWGRWASEIRDPTRRKRLWLGTFDTAEEAATEYDKAAVMLKGVNAVTNFHNTVVPEKDTPLLGTTDGFATSSPTSVLAYDSGYSTAGFESFCSGEVDALGFDIEMPLMTDMNVGVGVGFGKKWWESEELEDFDVDEFLTWPD 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0734 262 MobiDBLite consensus disorder prediction 74 111 - -
Mibi08g0734 262 MobiDBLite consensus disorder prediction 74 95 - -
Mibi08g0734 262 ProSiteProfiles AP2/ERF domain profile. 113 170 IPR001471 GO:0003700|GO:0006355
Mibi08g0734 262 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 27 182 - -
Mibi08g0734 262 SUPERFAMILY DNA-binding domain 113 171 IPR016177 GO:0003677
Mibi08g0734 262 SMART rav1_2 113 176 IPR001471 GO:0003700|GO:0006355
Mibi08g0734 262 Pfam AP2 domain 113 161 IPR001471 GO:0003700|GO:0006355
Mibi08g0734 262 Gene3D AP2/ERF domain 112 171 IPR036955 GO:0003700|GO:0006355
Mibi08g0734 262 PRINTS Ethylene responsive element binding protein signature 114 125 IPR001471 GO:0003700|GO:0006355
Mibi08g0734 262 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Mibi08g0734 262 PIRSF PTI6 7 262 IPR017392 GO:0003700
Mibi08g0734 262 CDD AP2 113 169 IPR001471 GO:0003700|GO:0006355
Mibi08g0734 262 FunFam Ethylene-responsive transcription factor 2 112 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0734 Mibi-ChrMibi08 15859636 15860424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0734 19 212 AP2-EREBP Transcription Factor Family AT4G27950 39.437 3.47e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi08g0734 AP2 1.9e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1247 05 15043214 15043906 Mibi08g0734 08 15859636 15860424 CCT
Mibi08g0734 08 15859636 15860424 Mibi08g0734 08 15859636 15860424 ECH