Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0718 ATGGAGAATAAACCAAATATATTGATGCAAAGATACGAATTAGGAAGGTTACTAGGCCAAGGAACCTTTGGGAAGGTATATTATGCTCGGAGTACAATAACAAACCAGAGTGTAGCTATTAAAATGGTAAGTAAGGACAAAGTTTTGAAATCTGGGCAAACTGAACAGATCAAGCGAGAAATATCTGTGATGAGACGTGTTAAACATCCCAATGTCATACATCTTTATGAGGTTATGGCCACCAAAAGTAAGATTTACTTTGTTATTGAATATGCTAAAGGTGGTGAGCTATTTGACAAGGTGGCCAAAGGAAAGCTGAAAGAAGATGTTGCTCATAAATATTTTCAGCAGCTAGTGAATGCCATAGACTTTTGTCATAGTAGAGGTGTTTACCACCGTGACATAAAGCCAGAGAACCTTTTGTTGGATGAAAATGAGAACTTAAAGGTCTCCGATTTTGGATTGAGTGCTCTAGTGGAATCCAAGGGACAGGATGGCTTACTACATACACCTTGTGGCACGCCTGCCTATGTTGCTCCTGAAATCATCAAACGGAAAGGCTATGATGGTGCCAAAGCTGATACCTGGTCTTGTGGGGTAGTTTTGTTTGTCTTACTGGCAGGTTATCATCCTTTTCATGATTCGAATTTGATAATGATGTATAGGAAGATTTCCAAGGCAGACTATAGATTCCCTAGTTGGTTCACCCCAGAAGTACGTAGATTGTTAACGAAAGTTTTGGATCCAAATCCTGATACTAGAATCCCCCTAGCTAAGATCAAGGAATTTTCTTGGTTTAAGAAGGGGCCATCTTCTCGAGATCGGAAATCTGAATGGGTGAACAAGAGTGTCTCCACATCAGGTACGAAGCCTTGTGATCAAACAGATGAAAGTGATAGCATAGCAGCAGAAGCAACACAAGAGTGGGCTGTGCCCAGAAGTATAAATGCTTTTGACATCATCTGCCGTTCTAAAGGTTTTGATTTATCGGGATTCTTTGAAGATAGTTTCAAGAAGAAAGAAGCCAGATTTTCTTCAAGGCAGCCAGCCTCGATAATTGTCTCCAAGCTCGAAGAAATCGCTTCGCATCTGAGGCTGAAAATAAAGAAAAGAGCTGCAGGTTCGTTGAAATTAGAAGGCCTCAAGGAAGGTAGAAAAGGGATTCTATCCATTGAGGTGGAAATCTTCCAGGCTGCTCCATGTTTTCATTTGGTTGAGATGAAAAAATTGAATGGAGACACTTTGGAATATCAGAGCTTAATGAAAGAGAAAATTAGGCCTGCTCTTAAGGATATTGTTTGGGTTTGGCTGGGGGAGCAGCAGCAACAATTACAACCATCAGAGGACCTGATACAGATGCAAGACCAGCCTGTGACAACTTCCTCATCTATGGCAAATTTGTAA 1404 0.4074 MENKPNILMQRYELGRLLGQGTFGKVYYARSTITNQSVAIKMVSKDKVLKSGQTEQIKREISVMRRVKHPNVIHLYEVMATKSKIYFVIEYAKGGELFDKVAKGKLKEDVAHKYFQQLVNAIDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALVESKGQDGLLHTPCGTPAYVAPEIIKRKGYDGAKADTWSCGVVLFVLLAGYHPFHDSNLIMMYRKISKADYRFPSWFTPEVRRLLTKVLDPNPDTRIPLAKIKEFSWFKKGPSSRDRKSEWVNKSVSTSGTKPCDQTDESDSIAAEATQEWAVPRSINAFDIICRSKGFDLSGFFEDSFKKKEARFSSRQPASIIVSKLEEIASHLRLKIKKRAAGSLKLEGLKEGRKGILSIEVEIFQAAPCFHLVEMKKLNGDTLEYQSLMKEKIRPALKDIVWVWLGEQQQQLQPSEDLIQMQDQPVTTSSSMANL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0718 467 MobiDBLite consensus disorder prediction 268 296 - -
Mibi08g0718 467 CDD CIPK_C 316 430 - -
Mibi08g0718 467 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
Mibi08g0718 467 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Mibi08g0718 467 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0718 467 Gene3D Transferase(Phosphotransferase) domain 1 92 287 - -
Mibi08g0718 467 FunFam Non-specific serine/threonine protein kinase 310 434 - -
Mibi08g0718 467 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0718 467 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0718 467 Gene3D Kinase associated domain 1, KA1 310 435 - -
Mibi08g0718 467 FunFam Non-specific serine/threonine protein kinase 6 305 - -
Mibi08g0718 467 Pfam NAF domain 312 370 IPR004041 GO:0007165
Mibi08g0718 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Mibi08g0718 467 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Mibi08g0718 467 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Mibi08g0718 467 MobiDBLite consensus disorder prediction 281 296 - -
Mibi08g0718 467 SUPERFAMILY Protein kinase-like (PK-like) 8 287 IPR011009 -
Mibi08g0718 467 MobiDBLite consensus disorder prediction 448 467 - -
Mibi08g0718 467 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0718 Mibi-ChrMibi08 15027404 15028807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0718 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 65.427 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi08g0718 Pkinase 1.4e-73 CL0016