Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0675 ATGATGGTTTTCATGGCGTTTCTCAATATTTCCATGCTCTCTTTGATTCTTATGGGCACAAAACAGAGCTTCTCTTTGTCTCAGAAAACCCAAGGTTTGGCTCTGCTTCGATTTAGAGACAGAGTGGTGAGTGATCCATTTGGAGCTTTATCGAATTGGAATGATAGAGATGGATTCCTTGATCCATGTTCTTGGTTCGGAATTGAATGTTTAGAAGGACAAATCGTTGTATTGAATCTAACAGACATGTGTCTCCATGGAACAATAGCCCCTGAAATTGCGAAGCTAACTCACATCAAATTCATAATTCTAAGGAACAATTCTTTCTTTGGAGAAATACCAAATGAGATCACACAATTAAAGAAACTGGAAGTACTAGACTTGAGACATAACAACTTTAGTGGAACTTTTCCATCTGAATCCAATCCTTCCTTGACTAGAATTTTCCTGGACCGTAATGATTATCTAGCTAACTTGACTCCGGAAATGTTTGAGCTCAAGAAGATTTCTGAATCTCATGTAAATGAAGACCTGTCAAAAGCAGCATGTGTAAGCAAATCTAGTATGAGGTACAAGAGGCATCTTCTTCAAATATCAATTCCTCCCTCTTCATTACCACCGGATTCTCAAGTTTTCTCACCATCTGAAACTCCCTCAGATTCTCCATCTGCATCACCTCCCATATCACCATCACCATCACCATCATCTGCCCCCATTTTTCTCCCTCCCTCGCCCTCGCCCTCACCGGCACCTTCACCTTCACCATCAACTATAATAGCACCAACTCCAGAAATATCACCAGCAAATCCACCTTTTGTTGTATCCAATCCACCACAGTCCAATGGGGTTTCAGCTCCTCCTTCTCCTACCACATTTTCAAACCAAGGGAGTCCTAAACCAAAGCATCGTTCTATGATAATTTGGTCTACAGTTGGTGGCTTCTCATTTTTAGTTTTGGTGTCAGCACTTGCTTTTGCTTGCTTCGGTAATGCTAAGGTTGTAACTGTAAAACCTTGGCCTATAAGCTTGAGTGGGCAGCTGCAGAAAGCTTTTGTTACAGGTGTGCCAAGTCTCAAACGAGCAGAACTTGAAGCAGCATGTGAAGATTTCAGCAATATTATTGGATCTCTTCCTGAGGGTACTATTTATAAGGGAACTCTCTCCAGTGGAGTTGAGATAGCTGTAGTATCCACTGCAGCAACCTCACATCAAAACTGGTCAAAACATATGGAAAGCCAATTTAAAAAGAAGTTAGAAACATTATCCAAAGTGAACCACAAGAACTTTGTGAATCTAATAGGGTTCTGTGAAGAGAAGCAGCCCTTCACAAGAATGATGGTTTTTGAGTATGCTCCAAATGGAACTCTATATGAACATCTACACATTAGAGAAGCAGAGCAACTTGACTGGGAATTGAGAAAGAGGATAGCCATGGGAATAGCTTACTGCCTCGAGCATATGCATCAACTAACACCACCTATTGCTCACACAAACCTACAATCTTCATCTATATGCCTAACTGAAGATTATGCTGCCAAAATATCAGATCTTAGTTTTTGGAATGACATTGTCAGTTCTATTAAAAGGGGTTCTTCTGCAGCCACAAGGCTCTTAGAAACACCATTAGCTTATACAAAGGGAAATGTTTATAGCTTTGGGTTAATACTATTTGAACTTATAACAGGTAAGATTCCCTATACAGAGGACAATGGATTTCTCACAGATTGGGCAGCTGAATATCTAAGATGGGGGAAGAAGCCCTTTACTGGTGTAGTGGACCCCACACTGAGCACTTTGAAAGAAGAAGAGGTTGAGAGGTGGTTCCAAGTGATGAGAGAATGTGTGCATTCAGACCCAGAGAATAGGCCAACTATGAGAGAGGTTACTGCTACATTGAAGGAAATTACAGCTATGGAGCCTGATGAAGTTACACCAAAATCATCTCCTCTTTGGTGGGCAGAGCTAGAAATCATGTCAGAGTATTTAAGTTGA 1992 0.4086 MMVFMAFLNISMLSLILMGTKQSFSLSQKTQGLALLRFRDRVVSDPFGALSNWNDRDGFLDPCSWFGIECLEGQIVVLNLTDMCLHGTIAPEIAKLTHIKFIILRNNSFFGEIPNEITQLKKLEVLDLRHNNFSGTFPSESNPSLTRIFLDRNDYLANLTPEMFELKKISESHVNEDLSKAACVSKSSMRYKRHLLQISIPPSSLPPDSQVFSPSETPSDSPSASPPISPSPSPSSAPIFLPPSPSPSPAPSPSPSTIIAPTPEISPANPPFVVSNPPQSNGVSAPPSPTTFSNQGSPKPKHRSMIIWSTVGGFSFLVLVSALAFACFGNAKVVTVKPWPISLSGQLQKAFVTGVPSLKRAELEAACEDFSNIIGSLPEGTIYKGTLSSGVEIAVVSTAATSHQNWSKHMESQFKKKLETLSKVNHKNFVNLIGFCEEKQPFTRMMVFEYAPNGTLYEHLHIREAEQLDWELRKRIAMGIAYCLEHMHQLTPPIAHTNLQSSSICLTEDYAAKISDLSFWNDIVSSIKRGSSAATRLLETPLAYTKGNVYSFGLILFELITGKIPYTEDNGFLTDWAAEYLRWGKKPFTGVVDPTLSTLKEEEVERWFQVMRECVHSDPENRPTMREVTATLKEITAMEPDEVTPKSSPLWWAELEIMSEYLS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0675 663 FunFam Leucine-rich repeat receptor-like kinase 31 174 - -
Mibi08g0675 663 MobiDBLite consensus disorder prediction 199 300 - -
Mibi08g0675 663 Gene3D Phosphorylase Kinase; domain 1 344 450 - -
Mibi08g0675 663 MobiDBLite consensus disorder prediction 202 219 - -
Mibi08g0675 663 FunFam Inactive receptor-like serine/threonine-protein kinase 342 450 - -
Mibi08g0675 663 Gene3D Ribonuclease Inhibitor 31 149 IPR032675 -
Mibi08g0675 663 Pfam Leucine rich repeat N-terminal domain 29 70 IPR013210 -
Mibi08g0675 663 ProSiteProfiles Protein kinase domain profile. 368 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0675 663 SUPERFAMILY L domain-like 33 167 - -
Mibi08g0675 663 MobiDBLite consensus disorder prediction 220 274 - -
Mibi08g0675 663 Pfam Protein tyrosine and serine/threonine kinase 372 631 IPR001245 GO:0004672|GO:0006468
Mibi08g0675 663 SUPERFAMILY Protein kinase-like (PK-like) 352 632 IPR011009 -
Mibi08g0675 663 PANTHER PROTEIN MALE DISCOVERER 2 9 659 - -
Mibi08g0675 663 Gene3D Transferase(Phosphotransferase) domain 1 451 647 - -
Mibi08g0675 663 MobiDBLite consensus disorder prediction 275 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0675 Mibi-ChrMibi08 13162126 13168816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0675 362 645 Receptor kinase-like Gene Family AT5G65700 33.444 2.11e-41 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mibi08g0675 PK_Tyr_Ser-Thr 1.4e-26 CL0016