Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0672 ATGGAAGACAAGTGTGGAAGCAAGAAACCTAACTTCTTACCATCTTCATCTTCATCATCCTCATCCTCATCAAAGCCTCCTTTGGGACCAGTTCCTTTACTTCAGATAAAACCTAATAATAACTCTAATCCTTCTCTTCTTCCTGCCATTGAAGCTGTTACTGGTAATAACTCACAGCAAGACAAGAACGAGCAACTTCAAACACCTAATGACTCTTCTGGTCAGAATAATAATAATGTCACTCTCAATGATGCCTCTTCTGAACAATACCATCATGAAACTAAGAACCAACATGAACCAACAACAAAAGTATCTGATCCTTCGGAAGAAGCTAGGAGGCTCAGACGAGTGATGTCAAATCGGATGTCTGCCAATAGATCAAGATTGAGAAAGCTTCAACATGTGGCTAATTTGGAGAGGCAATGTGCACAACTGAAGAATCAGATAACTTTTCTTCAGCCTCAAGTTGAAGCATATACCAATTTAAAGCACAAGTTGATGTTAGAGCAAACAGTCTTAACGCAACGATTTTCAGCTCTGGAGAATGAAACACTGCTTAAACAAGCTGAAATTGAAAGGAATCAAGCAGAAGTGTATGAGCTGAGGGAATTAGAGAAGCAACAGAGAGAGGCAGAAGCGCAAGCAATGATGATGGCTTTTGCACATTGGGACACTCTTCCCAATAATCAGCAAATATTGGTTAATACTGATATTCCAGCTCAAGGTTTTCATAACATGGAAGGAATGTCAGAAATGGAAGTTGATGAGCAGACAATGAACTTGGACAGTCTTGCGTCAATGAATGAGTTGGATGCCATTGTTAACCCTCCAAAGCTCAGTGACAACAGTGTTGCTAGCTCAGAGTTTCGCTCTTATTTTTAG 882 0.4002 MEDKCGSKKPNFLPSSSSSSSSSSKPPLGPVPLLQIKPNNNSNPSLLPAIEAVTGNNSQQDKNEQLQTPNDSSGQNNNNVTLNDASSEQYHHETKNQHEPTTKVSDPSEEARRLRRVMSNRMSANRSRLRKLQHVANLERQCAQLKNQITFLQPQVEAYTNLKHKLMLEQTVLTQRFSALENETLLKQAEIERNQAEVYELRELEKQQREAEAQAMMMAFAHWDTLPNNQQILVNTDIPAQGFHNMEGMSEMEVDEQTMNLDSLASMNELDAIVNPPKLSDNSVASSEFRSYF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0672 293 Gene3D - 111 166 - -
Mibi08g0672 293 SMART brlzneu 108 172 IPR004827 GO:0003700|GO:0006355
Mibi08g0672 293 Pfam bZIP transcription factor 109 166 IPR004827 GO:0003700|GO:0006355
Mibi08g0672 293 MobiDBLite consensus disorder prediction 35 87 - -
Mibi08g0672 293 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 115 130 IPR004827 GO:0003700|GO:0006355
Mibi08g0672 293 Coils Coil 182 214 - -
Mibi08g0672 293 Coils Coil 128 155 - -
Mibi08g0672 293 PANTHER BASIC LEUCINE ZIPPER 34 53 219 - -
Mibi08g0672 293 SUPERFAMILY Leucine zipper domain 112 166 IPR046347 GO:0003700|GO:0006355
Mibi08g0672 293 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 110 157 IPR004827 GO:0003700|GO:0006355
Mibi08g0672 293 MobiDBLite consensus disorder prediction 1 113 - -
Mibi08g0672 293 MobiDBLite consensus disorder prediction 88 113 - -
Mibi08g0672 293 MobiDBLite consensus disorder prediction 10 28 - -
Mibi08g0672 293 CDD bZIP_plant_RF2 113 159 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0672 Mibi-ChrMibi08 12969360 12972049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0672 103 189 bZIP Transcription Factor Family AT3G58120 32.184 3.26e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi08g0672 bZIP_1 1.2e-10 CL0018