Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0670 ATGATTGAAAAGAAGGAGGATTTTCTCATTGTGGCGCCATTTGAGTGTGCATGGCGAAAAGATTTGAAATTCCGAGAAGCAGGTCGGGGTTGCGTGGTTTTCGAAGCTTTTGCACGCAACGATATTACACTGGTTTTTAGGGAGAATGAGGGAAGTCGGCACTACCATTATAAAAGGGATAGCAGTCCTCACTATACCGTCATTTTGGGGAGCCATAGGAATAGAAGGCTGAGAATTGAGGTTGATGGAAAAACCGTCGTGGATGTGGCTGGTGCTGGACTTTGTTGCCCTTCATCATTCCAGTGTTATTGGATCAGCATCTACGATGGGTTGATTAGCATCGGCAAAGGAAAATACCCTTTCCAGAATATTGCCTTCCAGTGGCTGGATTCTAATCCTAACTATAATGTTCAGTATATTGGGCTCTGCAGCTGGGATAAACACGTTGGATATAGAAATGTTAACGTGTTGTCGCTAACACACAATCATATGTCCCAGTGGAAGCACGTGAGTTTTGGTGAATATCAAGTTCAGGAGGAGGGTGACGAGGAGTTGGGAGACAAACTGATGGACTATGACAATTGGGGGCTGAATAATTTTCTGGAGAGCTGGGAATTGTCTGATGTTTTGTTTATTGTTGGTGCAGAGGAAAGACCTGTACCTGCTCATAAGGCCATTTTATCCGCATGTGGGGATTTTCCTATAGCCTCATCATTCTCTGTTATTTCACTGCCCACAGTTACTTACCCGGTTCTTCACGCATTGCTGCAGTATATCTACGCCGGCTGGACTGAGATTCCTCTGGAAATGCTCGGTTCCTTGAGGACTTTAAGTTTACAGTTTGAAGTTATGCCACTGGTTAAACAATGTGAAGAGACTATGGAGCGGTTTAAGCTAAACCAAAAGCTTGTCTCGGGGAAAAATGTGGAGTTATCATTTCCAAATACGAGGCCTCATTGTTGTTCAACTTTGCCATCACTTCCTTTCAGTAGTCAGAGGCTGAAACAATTGCAATTAACTGGCCAGTACAGTGATGTAAACGTATATATTGAGGGTTATGGACTCATTACCCAAGCACATAAAATTGTTCTCAGTTTATGGAGCATCCCATTTGCCAAGATGTTCACAAATGGAATGAGTGAAAGCATGTCTTCAGAGATCACTTTAAGGGATGTGCCACCAGAAGTTTTCAAAGCTATGCTTGACTTCTTATACAGCGGGAAGCTAAATGATGAAGTTAATATAGATTCTGGTTCTTTGTTGCTGGAGCTGCTTTTATTGGCTGACCAATTTGGAGTGACTCTTCTTAACCAAGAGTGCTGTAAAATGCTTCTAGATTGCCTCTCAGAGGGATCGAGTCTCTTGGGTGAAGGACTCATTATGCCCACTCCTTCAAGCGGTTTCTTTGATCCCATCTTGTATACATATTAA 1431 0.4284 MIEKKEDFLIVAPFECAWRKDLKFREAGRGCVVFEAFARNDITLVFRENEGSRHYHYKRDSSPHYTVILGSHRNRRLRIEVDGKTVVDVAGAGLCCPSSFQCYWISIYDGLISIGKGKYPFQNIAFQWLDSNPNYNVQYIGLCSWDKHVGYRNVNVLSLTHNHMSQWKHVSFGEYQVQEEGDEELGDKLMDYDNWGLNNFLESWELSDVLFIVGAEERPVPAHKAILSACGDFPIASSFSVISLPTVTYPVLHALLQYIYAGWTEIPLEMLGSLRTLSLQFEVMPLVKQCEETMERFKLNQKLVSGKNVELSFPNTRPHCCSTLPSLPFSSQRLKQLQLTGQYSDVNVYIEGYGLITQAHKIVLSLWSIPFAKMFTNGMSESMSSEITLRDVPPEVFKAMLDFLYSGKLNDEVNIDSGSLLLELLLLADQFGVTLLNQECCKMLLDCLSEGSSLLGEGLIMPTPSSGFFDPILYTY 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0670 476 Gene3D Potassium Channel Kv1.1; Chain A 329 450 IPR011333 -
Mibi08g0670 476 Pfam BTB/POZ domain 197 295 IPR000210 GO:0005515
Mibi08g0670 476 Pfam BTB/POZ domain 334 445 IPR000210 GO:0005515
Mibi08g0670 476 Gene3D Potassium Channel Kv1.1; Chain A 195 311 IPR011333 -
Mibi08g0670 476 PANTHER OS05G0345500 PROTEIN 2 450 - -
Mibi08g0670 476 CDD BTB_POZ_ZBTB_KLHL-like 206 281 - -
Mibi08g0670 476 SMART BTB_4 344 448 IPR000210 GO:0005515
Mibi08g0670 476 SMART BTB_4 207 298 IPR000210 GO:0005515
Mibi08g0670 476 CDD BTB_POZ_ZBTB_KLHL-like 343 414 - -
Mibi08g0670 476 SUPERFAMILY POZ domain 196 295 IPR011333 -
Mibi08g0670 476 Pfam Farnesoic acid 0-methyl transferase 54 149 IPR022041 -
Mibi08g0670 476 ProSiteProfiles BTB domain profile. 207 268 IPR000210 GO:0005515
Mibi08g0670 476 SUPERFAMILY POZ domain 331 445 IPR011333 -
Mibi08g0670 476 ProSiteProfiles BTB domain profile. 344 413 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mibi08g0670 BTB 6.3e-21 CL0033