Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0665 ATGCTGCCCATCTCAATGGCCTCTGAAGATAATCACTTCCACATATTCCAGTGGCATCTCATTAAAATAAATCACTCAAACTTCCACTCATATAGTCATGGCATCTTCCTCCTACTTTTCTTCTTCTCCATCATCATTCTGATCGCCACATTGTTCCTTCTCACCCACTTATGTTGCCGCCGCCAAAATAGCGCGGCTTCTCGGGAAGCCCCGGCCACTAGTCTTCATTGGGGTAAGTTAGAGATGGGATCAATGGAGAATAAGAGTGTTGTGGGAGATCCAAATGTAGAATGCTGCATATGTTTAAGTGTGTTAAAGGAGGGAGGAAAAGTGAAGGTGTTGCCAGAATGTGAGCATGCTTACCATTCAGAGTGTGTGGAAATGTGGTTAAGTGCAAATCCAAGTTGTCCTCTTTGTAGATCTTCACTTCATAGATTTATGAGTAATAATGCTATCAACAACAATGTATGA 471 0.4225 MLPISMASEDNHFHIFQWHLIKINHSNFHSYSHGIFLLLFFFSIIILIATLFLLTHLCCRRQNSAASREAPATSLHWGKLEMGSMENKSVVGDPNVECCICLSVLKEGGKVKVLPECEHAYHSECVEMWLSANPSCPLCRSSLHRFMSNNAINNNV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0665 156 Pfam Ring finger domain 97 140 IPR001841 -
Mibi08g0665 156 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 36 142 IPR044675 -
Mibi08g0665 156 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Mibi08g0665 156 SUPERFAMILY RING/U-box 89 149 - -
Mibi08g0665 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 149 IPR013083 -
Mibi08g0665 156 SMART ring_2 98 139 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0665 Mibi-ChrMibi08 12729211 12729681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0665 15 144 C3H Transcription Factor Family AT3G11110 35.461 5.60e-19 77.0