Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0663 ATGAGCTCCCTACGTGATTCTGATTCTTCAATGGCTACGTCTTCTTCTTCTTCTTCTTGGATTCGAGGTCGTTGTTTAGGTAAGGGCTCGTTTGGCACTGTGAATATCGGAGTCAATAAATCGGACGGTCAGATTTTCGCGGTGAAGTCCGTGGATCTTCAATCGGGTCGGGCCGAGGCTTTAGAGAATGAGATTCGGATCCTCCGAAACATGTCGTCGCCGTACGTGGTGACCATTCTCGGCGACGACGAAACGACGTCGTATCGGAACATGTATCTGGAGTACCTGCCAGGTGGCACTCTCGCTGACCTGGCGTCTACTGGCGGTAGACATGCTGACGTGGACGAGCGCGTGGTGAGGTACTTCACCTGGTGTGTGGTCAACGCGCTGAGGTACGTCCACGCGCAGCGCATCGTCCATTGCGACGTGAAGGGGAAGAATGTTCTGGTGGGGCATAATCGCGGTGTGGCCAAGCTCGCCGATTTCGGATCGGCGGTGGAGGATTGTTCATCCGGTGATTTGACGGTGGGGATTCTGCCACGTGGAAGCCCTCTGTGGATGGCGCCGGAGGTGATTAGGAGGGAATCACAGGGGCCAGAATCTGACGTGTGGTCGTTAGGATGTACGGTCATCGAGATGGTCACTGGAAAGCCAGGCTGGCACTACGGCAACGGGTTTAACACGCTGAGTCGAATCGGTTATTCGGACGAGTTGCCTGAGTTTCCGAGTCAATTGTCAGAACTCGGTCGTGATTTCCTCGGAAGGTGTCTAAGGAGAGAACCAAGTGAACGGTGGAGCTGTGATCAGCTACTGCAACATCCATTTTTGCTTGCTACACCGCCCAATAAGGTTGCAGAGTCATCTCCTCGGTGTATTCTCGATTGGATAAGCTCGGATGAATTCAAGGAAGGAGAGGAAGAAGAAACCAGAATTAGCAATGAGAACTCAGCCAATGAGAGGATTGGTAAATTAGCATCAAGCTCAAGGGTAAATTGGGAAATTGAGGATGGTTGGTTGGAGGTGAGGGCATTGGCCGCTACCAACACAGAATCAGGGGAAATTGAAGATGAAGGGACAAGTTCGGGATTTGGTGATTTGAGGAGGGTAGAAGAGGGAATAGAAATGGGGATAGGTTGGGAATATTTGAAAATGGGGAGGGTAAATGTGGGGATAAGGGACTGGGGAGAGGATCAAAGTGAAAATGATTGGAGATATGGGGATGGGCTGCACAAGTTGGATCTGTTGAGGAAGATAAGGGCAATAACAAGCATTTACAGCTTATGGTAGTAA 1290 0.5085 MSSLRDSDSSMATSSSSSSWIRGRCLGKGSFGTVNIGVNKSDGQIFAVKSVDLQSGRAEALENEIRILRNMSSPYVVTILGDDETTSYRNMYLEYLPGGTLADLASTGGRHADVDERVVRYFTWCVVNALRYVHAQRIVHCDVKGKNVLVGHNRGVAKLADFGSAVEDCSSGDLTVGILPRGSPLWMAPEVIRRESQGPESDVWSLGCTVIEMVTGKPGWHYGNGFNTLSRIGYSDELPEFPSQLSELGRDFLGRCLRREPSERWSCDQLLQHPFLLATPPNKVAESSPRCILDWISSDEFKEGEEEETRISNENSANERIGKLASSSRVNWEIEDGWLEVRALAATNTESGEIEDEGTSSGFGDLRRVEEGIEMGIGWEYLKMGRVNVGIRDWGEDQSENDWRYGDGLHKLDLLRKIRAITSIYSLWX 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0663 429 SMART serkin_6 20 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0663 429 SUPERFAMILY Protein kinase-like (PK-like) 17 299 IPR011009 -
Mibi08g0663 429 ProSiteProfiles Protein kinase domain profile. 20 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0663 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mibi08g0663 429 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 12 348 - -
Mibi08g0663 429 Gene3D Transferase(Phosphotransferase) domain 1 13 335 - -
Mibi08g0663 429 Coils Coil 51 71 - -
Mibi08g0663 429 FunFam Serine threonine protein kinase putative 18 325 - -
Mibi08g0663 429 Pfam Protein kinase domain 23 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0663 429 CDD STKc_MAPKKK 20 276 - -
Mibi08g0663 429 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0663 Mibi-ChrMibi08 12696583 12698826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0663 14 370 MAP Kinase Kinase Kinase AT1G07150 52.732 2.40e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi08g0663 Pkinase 3.2e-57 CL0016