Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0659 ATGTCGTGCTCCGTGGCTCTCGCTAATTCTCCGGTGTTCTCTCCGTCGTCTTCTCTCTTCTGCAACAAACCCTCTTCCTCACCAGAATCCCTTCCTCTCTCTTTATCTCACCTCAAGCCTTCTTCTTCTTCTTCTGCTTCTTCATCTTCTTCTCCTTCACCTTCTTCTCCTTCCTCTCCTTTCCGCCTCCGTCTCCTCAAGCCTCTTCCTCCTCCTTCCTCCTCCTCCTCTTCTTCAACCTCTCCTAACGGCACCGTTTTGAAGAGGAAAAGGCCTGCTAGGCTCGCTATTCCTGTCTCCTCTCTTTCTATTGGTGTTCCTTCGACTCCTTCTTCTTCTTTGATGGCTCGAGATGATCTTGAGGCCGAAGGGCTAGGGTTTTCTGTTTATTGTAAGAGAGGTAGGCGAGAGTACATGGAGGATCGTTACTCTGCTGCTGTTAATCTCCATGGACAGCCCAAACAGGCTTTCTTTGGTGTATTTGATGGGCACGGAGGTTCAAAAGCTGCTGAGTTTGCTGCACATAACTTAGAAAGGAACGTCATGGATGAAGTGACTAGAAGAGATGATGAAGATGACATAGAGGAGGCAGTGAAGCATGGTTACCTGAACACTGATTCTGGTTTTTTAAAAGAGGATCTTCATGGTGGCTCATGCTGTGTAACTGCACTGATTAGGAATGGAAACCTTGTTGTCTCTAACGCCGGCGATTGCCGAGCTGTTATTAGCCGAGGCGGCGTCGCTGAAGCCCTCACATCTGATCACAGGCCCTCTAGGGAAGATGAAAAGGACAGAATTGAGACCACTGGTGGCTATGTTGATTTATGCCGTGGTGTTTGGAGGATCCAGGGATCCCTAGCTGTTTCCAGAGGAATTGGGGATCGGTATTTGAAGCAATGGGTGATAGCTGAACCTGAGACTAAAGTTCTCAGGATTGAACCTGAACATGACTTGTTGATATTAGCTTCAGATGGATTATGGGATAAGGTTACTAATCAAGAAGCTGTAGATATTGCTCGTCCTTTTTGCAATGGGAGTAGTAATATAGCACAACCATTGATGGCCTGTAAAAAGCTTGTAGATTTGTCTGTTTCAAGAGGCTCAAGTGATGATATAAGTGTTATGCTGGTAAAGCTGGGACAATTTATCTAA 1152 0.4627 MSCSVALANSPVFSPSSSLFCNKPSSSPESLPLSLSHLKPSSSSSASSSSSPSPSSPSSPFRLRLLKPLPPPSSSSSSSTSPNGTVLKRKRPARLAIPVSSLSIGVPSTPSSSLMARDDLEAEGLGFSVYCKRGRREYMEDRYSAAVNLHGQPKQAFFGVFDGHGGSKAAEFAAHNLERNVMDEVTRRDDEDDIEEAVKHGYLNTDSGFLKEDLHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDEKDRIETTGGYVDLCRGVWRIQGSLAVSRGIGDRYLKQWVIAEPETKVLRIEPEHDLLILASDGLWDKVTNQEAVDIARPFCNGSSNIAQPLMACKKLVDLSVSRGSSDDISVMLVKLGQFI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0659 383 Gene3D - 124 382 IPR036457 -
Mibi08g0659 383 SUPERFAMILY PP2C-like 125 380 IPR036457 -
Mibi08g0659 383 MobiDBLite consensus disorder prediction 1 60 - -
Mibi08g0659 383 MobiDBLite consensus disorder prediction 1 92 - -
Mibi08g0659 383 ProSiteProfiles PPM-type phosphatase domain profile. 126 379 IPR001932 -
Mibi08g0659 383 CDD PP2Cc 126 379 IPR001932 -
Mibi08g0659 383 Pfam Protein phosphatase 2C 127 372 IPR001932 -
Mibi08g0659 383 PANTHER PROTEIN PHOSPHATASE 2C 58 378 IPR015655 GO:0004722|GO:0006470
Mibi08g0659 383 SMART PP2C_4 116 377 IPR001932 -
Mibi08g0659 383 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Mibi08g0659 383 MobiDBLite consensus disorder prediction 70 86 - -
Mibi08g0659 383 FunFam probable protein phosphatase 2C 25 119 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0659 Mibi-ChrMibi08 12564389 12566321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0659 1 383 PP2C-type Phosphatase Gene Family AT2G30020 66.334 6.19e-171 481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1437 05 17030612 17032204 Mibi08g0659 08 12564389 12566321 CCT
Mibi08g0659 08 12564389 12566321 Mibi08g0659 08 12564389 12566321 ECH
Mibi05g1437 05 17030612 17032204 Mibi08g0659 08 12564389 12566321 ECH