Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi08g0610 | ATGAATCCCTTAACCCTGGTGAAGCGCATTCAGAATATCAATTCCAAAGAAGCCTCTCTGGGAATCAGCGAGGATGCTTCCTGGCACGCCAAATACAAAGATTCCGCTTATGTCTTCGTCGGCGGCATTCCCTTCGATCTCACCGAGGGTGATCTCCTCGCTGTTTTCGCTCAATATGGGGAAGTGGTTGATGTAAATCTTGTCCGGGACAAAGGTACTGGGAAGTCCAAAGGTTTTGCATTTCTTGCATATGAAGATCAAAGGAGCACAAATCTTGCTGTAGATAATTTGAATGGAGCTCAGGTTTTAGGTCGGGTCATTCGAGTTGATCACGTAACTAAATACAAAAAGAAAGAAGAGGAAGATGAAGAGACAGAGAGGAAGAAAAGGGAGGAACGAGGTGTTTGTCGAGCTTTCCAAAGAGGTGAATGCACACGTGGAGCTAGCTGCAAATTTTCTCATGATGAGCAAAGAGCTGCAAACACAGGTTGGGGTGCCCCTGAGGATGCTAGTTCAAAGTGGGGGCATGACAAATTTGACAGTCACAGAAAAGAGAAAAAATATGGAAATAGTCATGATAAATTCGAAGGAAGAGAACGTGGAAGAGAGAATAGATCTAGGAAGCCAGGTGATGTTGAGCTTGAATTAAAGACCAGAGATTCTGATAAAAGGGAAGAAAAGAGGTACAGGAGACAGGATGATGATGATTTTGGTAGTAGGTCAAGGGAAGATCATATTAGCAGGGAAGATAGGAGATCAAGGCAGCACAGAGAGTATGATTCCACATCAAGATCCAGAGAAAATTATGATAGGAAGCAACGGGACAGATCAAACAGACATGACACAGATAGATCAGAGCCAAAAGTAAAGTATGATTCGGACAGGAGAGAAGAAAAGGGATCAAGAAGGTAA | 912 | 0.4331 | MNPLTLVKRIQNINSKEASLGISEDASWHAKYKDSAYVFVGGIPFDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQVLGRVIRVDHVTKYKKKEEEDEETERKKREERGVCRAFQRGECTRGASCKFSHDEQRAANTGWGAPEDASSKWGHDKFDSHRKEKKYGNSHDKFEGRERGRENRSRKPGDVELELKTRDSDKREEKRYRRQDDDDFGSRSREDHISREDRRSRQHREYDSTSRSRENYDRKQRDRSNRHDTDRSEPKVKYDSDRREEKGSRR | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi08g0610 | 303 | MobiDBLite | consensus disorder prediction | 161 | 303 | - | - | |
Mibi08g0610 | 303 | PANTHER | RNA-BINDING MOTIF PROTEIN, X-LINKED 2 | 1 | 248 | - | - | |
Mibi08g0610 | 303 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 38 | 108 | IPR000504 | GO:0003723 | |
Mibi08g0610 | 303 | CDD | RRM_ist3_like | 27 | 112 | IPR045844 | GO:0000398|GO:0003723 | |
Mibi08g0610 | 303 | SUPERFAMILY | CCCH zinc finger | 132 | 155 | IPR036855 | GO:0046872 | |
Mibi08g0610 | 303 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 36 | 114 | IPR000504 | GO:0003723 | |
Mibi08g0610 | 303 | SMART | rrm1_1 | 37 | 110 | IPR000504 | GO:0003723 | |
Mibi08g0610 | 303 | FunFam | Zinc finger CCCH domain-containing protein 25 | 26 | 130 | - | - | |
Mibi08g0610 | 303 | Gene3D | - | 127 | 196 | - | - | |
Mibi08g0610 | 303 | SUPERFAMILY | RNA-binding domain, RBD | 26 | 116 | IPR035979 | GO:0003676 | |
Mibi08g0610 | 303 | MobiDBLite | consensus disorder prediction | 171 | 303 | - | - | |
Mibi08g0610 | 303 | Gene3D | - | 8 | 126 | IPR012677 | - | |
Mibi08g0610 | 303 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 135 | 155 | IPR000571 | GO:0046872 | |
Mibi08g0610 | 303 | ProSiteProfiles | Zinc finger C3H1-type profile. | 130 | 157 | IPR000571 | GO:0046872 | |
Mibi08g0610 | 303 | SMART | c3hfinal6 | 132 | 156 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi08g0610 | Mibi-ChrMibi08 | 11015831 | 11018402 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi08g0610 | 33 | 128 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 32.292 | 8.19e-06 | 45.4 |