Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0606 ATGTCAGTTTCATGTAGCGAATTTTGTTGGATGATTTCTGTTGAACTTCTTCCTGCTTTGTTTGCCTTCCAGCTTATGAGCCATTACCTATGGCATAGTGGGACGATTTTTAGTAGCAACATGCCGTGGGAATACGGGGAAGTGGTTGATGTAAATCTTGTCCGGGACAAAGGTACTGGGAAGTCCAAAGATAATTTGAATGGAGCTCAGGTTTTAGGTCGGGTCATTCGAGTTGATCACGTAACTAAGTACAAAAAGAAAGAAGAGGAAGATGAAGAGACAGAGAGGAAGAAAAGGGAGGAACGAGGTGTTTGTCGAGCTTTCCAGAGAGGTGAATGCACACGTGGAGCTAGCTGCAAATTTTCTCATGATGAGCAAAGAGCTGCAAACACAGGTTGGGGTGCCCCTGAAGATGCTATTTCAAAGTGGGGGCATGACAAATTTGACAGTCACAAAAAAGAGAAAAAATATGGAAATAGTCATGATAAATTCGAAGGAAGAGAATGTGGAAGAGAGAATAGATCTGGGAAGCCAGCTGATGATGAGCTTGAATTAAAGACCAGAGATTCTGATAAAAGGGAAGAAAAGAGGTACAGGAGACAGGATGATGATGATTTTGGTAGTAGGTCAAGGGAAGATGATATTGGCAGGGAAGATAGGAGATCAAGGCAGCACAGAGAATATGATTCCACATCAAGATCCAGAGAAAATTATGATAGGAAGCAACGGGACAGATCAAACAGACATGACACAGATAGATCAGAGCCAAAAGTAAAATATGATTCGGACAGGAGAGAAGAAAAGGGATCAAGAAGGTAA 819 0.4188 MSVSCSEFCWMISVELLPALFAFQLMSHYLWHSGTIFSSNMPWEYGEVVDVNLVRDKGTGKSKDNLNGAQVLGRVIRVDHVTKYKKKEEEDEETERKKREERGVCRAFQRGECTRGASCKFSHDEQRAANTGWGAPEDAISKWGHDKFDSHKKEKKYGNSHDKFEGRECGRENRSGKPADDELELKTRDSDKREEKRYRRQDDDDFGSRSREDDIGREDRRSRQHREYDSTSRSRENYDRKQRDRSNRHDTDRSEPKVKYDSDRREEKGSRR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0606 272 Gene3D - 86 175 - -
Mibi08g0606 272 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 64 217 - -
Mibi08g0606 272 ProSiteProfiles Zinc finger C3H1-type profile. 99 126 IPR000571 GO:0046872
Mibi08g0606 272 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 104 124 IPR000571 GO:0046872
Mibi08g0606 272 SUPERFAMILY RNA-binding domain, RBD 39 87 IPR035979 GO:0003676
Mibi08g0606 272 MobiDBLite consensus disorder prediction 150 272 - -
Mibi08g0606 272 SUPERFAMILY CCCH zinc finger 101 124 IPR036855 GO:0046872
Mibi08g0606 272 SMART c3hfinal6 101 125 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0606 Mibi-ChrMibi08 10870594 10872670 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi08g0606 zf-CCCH 5.2e-07 CL0537