Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0582 ATGAAGTGGGAAATGGATATTCTCTCATCATCATCTTCTTCTTCTCCACATATCTCCAATAATCCCACTTGGCTAATTCCAGAAGCCATGATGAACACATCAACAACAAAATGGACAGTTTCAGAGAACAAGCTTTTTGAGAATGCTCTTGCAGTGTATGATAAAGACACACCAGATCGGTGGGTGAAAGTTGCTGCAATGATTCCAGGGAAGACAGTGGGAGATGTGATTAAGCAGTACAAAGAATTAGAAGAAGATGTTTGTAATATAGAAGCTGGGTTGGTACCAATTCCAGGTTATTACAATAGTAACACCAACAGAACAACAACAGCAACCTCACATCAATTCACCTTGGATTGGGTTAATTCTTCTGGATTTGATGGCTTCAAATCTCATGGTGGAAAGAGATCTTCATCATCAGGAAGACCCCCAGAACATGAAAGAAAGAAAGGTGTCCCATGGACAGAAGAAGAACATAAACTGTTTCTTCTGGGATTGAAGAAGTATGGGAAGGGAGATTGGAGGAACATATCAAGGAATTTCGTGGTGACTCGGACTCCGACTCAGGTGGCGAGTCATGCACAGAAGTACTTCATAAGGCAGCTTTCAGGAGGGAAAGACAAGAGAAGAGCAAGCATTCATGATATAACAACAGTGAATCTGTCAGAAACCACAAGGCCACCTGCTTGTTTAGAAGACAACAATAACATAAAAAATGGATGTAACCCAAAGCAGGAGGCAAATATTCCAAGTGCTGCTAATTTAGGTCAAGCACATTTTCAATGGAACCAGCATGCAAATGCAGGAGGAGGTGGAGTTATGGGGTTTAATCCTTATGGAGTTAATAACTCTTATGGGATGAAAATGCAAGGCCAAAATCTGCATAGAAGTGCTCTTCTTTATAATGATCATGATTCCTCTTCTTACTTTGGATCACCTCAAGCTCAGAACAATATGGTTTTCCAAATGCATTCTGCTTCTGCTCACCACTTTTGA 996 0.4066 MKWEMDILSSSSSSSPHISNNPTWLIPEAMMNTSTTKWTVSENKLFENALAVYDKDTPDRWVKVAAMIPGKTVGDVIKQYKELEEDVCNIEAGLVPIPGYYNSNTNRTTTATSHQFTLDWVNSSGFDGFKSHGGKRSSSSGRPPEHERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLSETTRPPACLEDNNNIKNGCNPKQEANIPSAANLGQAHFQWNQHANAGGGGVMGFNPYGVNNSYGMKMQGQNLHRSALLYNDHDSSSYFGSPQAQNNMVFQMHSASAHHF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0582 331 CDD SANT 37 83 IPR001005 -
Mibi08g0582 331 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 149 201 IPR006447 GO:0003677
Mibi08g0582 331 FunFam transcription factor MYB1R1 152 203 - -
Mibi08g0582 331 SUPERFAMILY Homeodomain-like 36 91 IPR009057 -
Mibi08g0582 331 CDD SANT 153 198 IPR001005 -
Mibi08g0582 331 FunFam Transcription factor SRM1 30 97 - -
Mibi08g0582 331 MobiDBLite consensus disorder prediction 139 153 - -
Mibi08g0582 331 Gene3D - 30 97 - -
Mibi08g0582 331 Pfam Myb-like DNA-binding domain 153 198 IPR001005 -
Mibi08g0582 331 ProSiteProfiles SANT domain profile. 154 202 IPR017884 -
Mibi08g0582 331 SUPERFAMILY Homeodomain-like 148 201 IPR009057 -
Mibi08g0582 331 SMART sant 34 86 IPR001005 -
Mibi08g0582 331 SMART sant 150 200 IPR001005 -
Mibi08g0582 331 Gene3D - 152 202 - -
Mibi08g0582 331 ProSiteProfiles Myb-like domain profile. 146 198 IPR001005 -
Mibi08g0582 331 MobiDBLite consensus disorder prediction 131 153 - -
Mibi08g0582 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 202 IPR017930 -
Mibi08g0582 331 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 33 303 IPR043363 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0582 Mibi-ChrMibi08 10370212 10371414 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g0582 Myb_DNA-binding 1.6e-12 CL0123