Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0547 ATGCAATTCTACCCTACCAACAACGAAAATCGTCACAATATTATTAACAATAGTGAATATTCGAAACTTTATGAGGATTACTTCAATTCTCTTCCTCCTGGATATCGATTCGTCCCTACTGATGAAGAACTCATCGTCTTTTATCTATTGAAGAAAGTGAGGAATGAGCCTTTGCCACCAAACCAGATCTTTGACGTTGATGTATATCAGCATGACCCAGAAATTGTTTATGATGAGCACAAGAGTGTTGGACAAAATGAGTGGTATTTTTTCTCACCAAGGGAAAGAAAATATCGAAATGGAAAAAGGCCAAAGAGATCAACGCAAGATGGGTATTGGAAGGCTTCAGGAACAGATACATTGATTTATTCAGAAGAAAAGATTGTTGGGAAGTGGAATACGTTGGTTTATTATAGAGGGAAGTCTCCAAAAGGAAAAAAGACGAATTGGATTATGCGTGAGTATAAACTTACACAATATTCTCATACGAGAACGAGTAACGCTGACATGAAGGTCTTTTAG 522 0.3697 MQFYPTNNENRHNIINNSEYSKLYEDYFNSLPPGYRFVPTDEELIVFYLLKKVRNEPLPPNQIFDVDVYQHDPEIVYDEHKSVGQNEWYFFSPRERKYRNGKRPKRSTQDGYWKASGTDTLIYSEEKIVGKWNTLVYYRGKSPKGKKTNWIMREYKLTQYSHTRTSNADMKVF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0547 173 PANTHER NAC TRANSCRIPTION FACTOR 56 31 159 - -
Mibi08g0547 173 Pfam No apical meristem (NAM) protein 32 157 IPR003441 GO:0003677|GO:0006355
Mibi08g0547 173 ProSiteProfiles NAC domain profile. 31 173 IPR003441 GO:0003677|GO:0006355
Mibi08g0547 173 SUPERFAMILY NAC domain 28 165 IPR036093 GO:0003677|GO:0006355
Mibi08g0547 173 Gene3D NAC domain 40 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0547 Mibi-ChrMibi08 9443239 9445231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0547 29 172 NAC Transcription Factor Family AT1G69490 51.034 4.23e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi08g0547 NAM 1.3e-31 No_clan