Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0523 ATGGAGTTCGTGGGCAAAACAGTGAAGAAGGAGGTCAAGGGGGTTGGGATTATCTCCGGAACAGTGAAATCGTTCGATTCATCTTCTGGGTTCGTTGAGATCGTTTACGAAGATGGTAATTCTGAGGAGCTTGAATCCTCTCATGTGGCTTCTCTTGTTCAGGCGAAGCGTCGAGGAAGAAAACCCAAGAAGAGGCGTCGTGTGGAAAACAAGCATGACACAGGTGGAAGCCAAGGTAATAATAATGATAATGATAATATTGGTGAGAATTTGGGTGTTTCCATGCTTAGTGATTCTGAATTTAGGGGGGTTTTGGATGAGGGTGTTTCTTCTAGTGAGAATTTGAAAGTAAATGGTGAATTAGATAGTGGGTTGAATAGAAGCCCTGGTAGGGAAAATGGGGCGGGAGAAAATTTGACTTTGGGAACTGGAAACATTGGGAATTTGAATTGGAGTGCCAGCTCTAACGGGATGAAAGAAGTTCAAAGGATGGAGAGTGGGTGTGAAGAGATATCCAAAGAAAGTATATATATTAATGGGAATTCCAGCATAATTGATTGTGTTAAAGATGGGCTTGATTTGAATGCTAGACTTAACGAGGCATTGGATCTGAACGATGGGTGTAGTTTACATGTTAATACTGAGGATGGTTTTGGGAAAAACGGTTGCATTGATTTGAATGTGGATGTGAGTCATGAAACTGATGCCAGCGTGGACGTGAGTAATTTAGGTTGTCCTGCAGCTGAAATTTCTAAGCGGGAATGTAATTTCGATTTGAATGTGGGGGTATGTGATGAAGCTAAGGAAGCTCAGGGTGATAGTGCTGGAGACAAATTGTCAGATGGAGGTGCTTCGTTCGGTGAAATGGGGCAAAGCCCTAAGTTAGGGACGGATATTAATCAAAATTCTGTACAAGACGATTGTGTTAAAAGGAATTTGGATGGTATCACTAATTCAACCGAATTTGAGGGAATTGACGATTTCCATGGGTCTGCATGTAAAGACCCTTCTGTGAGTTTGATTGAGGAAAAGGAAGATGGGGTTTACAATGGAGGTGCTGTGGCTCCTGACTCTCTTGGGGTTTCAAATGCTATTTCTACTAGGGATTGTGATTCTGTGGAGGTTTGTCAGGAGCATAAGCCTTCTGAAGCTGGGATTGCTATAACCCCTGAATGTCAAAATGAGCCTGGAAGCCAATGTAAACAAGGAAGTGGGCGAAGGAAGAGAAGAAAGCTCTCAGATAATCTGAAATCTCCTCCAGAGACAGTTTTAAGGAGGAGTTCTCGCCGTGCATCAGCTCTAAAACGTGATTCAAGCCCTATAACATCGAATGTGACGGATGATCCTTTGATGTCTCCTGGGCCCAGTGCCATAACAGAAGAAAAGACAATTGTTTCTGGTTCTGAGCAGTGTGAACAGTGCAGTGAACTTCCTCCAAAGCTGCAACTACCCCCTTCTTCTCAAAATTTGAACTTAGATGACATTCCTGTTCTTGATCTTTTTTCCATTTATGCTTGTTTGAGGTCCTTTAGTACTATGCTATTTTTAAGTCCTTTCGAGTTGGAGGATTTTGTAACTGCACTGAAGAGTGTGAATCCTAACATGTTATTTGACAACATTCATGTTTCTGTTTTACAAACTCTTAGAAAGCACTTGGAATACCTTTCAAATGAGGGTTGCCAATCTGCATCTGATTGCCTAAGAAATTTGAACTGGGATTTGTTGGACCTTGTTACATGGCCCATTTTTATGGCTGAGTATGTTCTGATTCACAGTTCTGGACTCAAAACTGGCTTTGATCTTAAGTACTTAATGTTTGGAGGTGATTACTACAAGCAGCCTGTACATTTAAAGATTGAAATTCTTCAGTGCCTTTGTGATGATATGATGGAAGTGGAAGCTATAAGGTTGGAGCTTAACAGAAGATCTTTAGTGGTTGAGGCTGATATGAGTTTTGATCAAAGTATGTATTTTGATATATGCAAGAAAAGAAGAGCTCTAATGGACATGTCTGGCAGCTTTTCCATGTCTGAGGAGATTGTTGATGTAACAAATGACTGGAACAGTGATGAATGCTGCCTTTGCAAGATGGATGGAAATTTAATATGTTGTGATGGTTGCCCTGCTGCATTCCACTCCAGGTGTGTGGGCATTGCAAGTGACCATTTACCTGAAGGCGATTGGTATTGCCCTGAGTGTGCAATCGGCAGACGTAACCCTTGGATGAAACCACAAAAATCACTTCGAGGAGCAGACCTTTTAGGGATTGATCCTCATGGTCGTCTTTATTTTGATAGCTGTGGTTACCTGTTAGTGGCAGATTCATCTGACATGAGATCCTTGATCAATTACTACCACATAAATGATCTGCATGTTGTAATTGAAGTGTTAAAAGCGGCCGATGCTTTCTATAGTAGCATATTAATGGCAATCTGCAAGCACTGGGGTATTCCTTTTAACTTAAATGTAGCAGCTGGTAAGGTGGAGCTCTCAAATCAAAGTGCTAGCAGGAGCATGCATATGAAGACAGAATACTCTGCTCCATATCCACCCTCAGCACCTTTTCCATCCTCAGAAGCATTCTTGGACAAGAATCAGTCTGCTGATCAAAGAAAGTATGAAGAAACGTCTACTGTACCACCTATTGGCGAAGAATTTCTCAAAGGTGAGAGACGGTTAGATTCAGAGATAATGACAGAAAGTCCCTGTGTTGTTTCAGAGGTATCAGCTGATACCACAAAAATGAGGTTAACCACTGATGATGATCCTCTAACACATGGACTCTATGATTCCAGTAGATCTGATGGGGCCCTGAATCAGCCAGGAATAGTTGAGAAATTGCACCCAGTCAGTCACTCTTCTTTGAGGTCTTCCCGCTCAGATACAAGCCATAAGATGAACTTAACATCTGCAGGTATTGGTAATACTGCATTGGCTATGTCCAATGGAAACCGAGCTACTTCAGGAATGCCATGGGGAATTGACTACATAAATTATTACAGTTTTGCTCGAACGGCTTCATTAGTGGCAGTGGAGTTGACACATAAATTACCTGATAAGGTCAACAAGAGTATTGAAATGTCTGAAGAAGACTTAATTTCAGAACAAGCGAAGATCATTATTAAGAAATCTCTGAACTTTTACTGGCCAAGCTCTCAAAATGTTAATGCAGCTGCCCAAAAGGAAAAATGTGGGTGGTGCTTTACATGCAAAGTTGAAAATGATGATAGAGATTGCTTGGTTAACACTGTGGTGATGCCTGTTCGGGAAGCGTCTAAAAGTGATGTAGTTGGGTTTCAGCTGAAAAACCAGAATGCCCATCTTAGAGATGTCATATTTTATGTTCTCTCCCTTGAGGATAGATTACGTGGGCTTCTATTGGGGCCTTGGTTGAGCCTCCATCATTCTAGGAATTGGCGTAACAATCTTCTTAAGGCATCTGATGTTGCATCTATTAAATCCTCATTACTGACTTTAGAGTCCAATTTGCGGCCTCGTGCTCTTTCGGCGGACTGGTGGAAACATGTGGATTCTGCTGTAACCATGGGTTCAGCTTGTCATATTGTTGCCAGTTCACGCACATCTTGGAGGCATAGTATTGGAAGGAAAAGGATAAGGTGCTCTGATATTGAGTCCAGTGCATCTTCTAATGCAAGTGGTTTGGGATCATATTGGTGGAGAGGTGGTCGGCTTTCCCGTCATTTGTTTAATTGGAAGGTTCTGCCCCACTCTTTAGTTACAAAGGCTGCTAGACAAGCTGGGTGTACTAAGATATCTGGCATTCTATATTTTGAGAATTCTGATTTTTCCAAGAGAAGCAAATGTGCTGCTTGGAGAGCTGCTGTTGAGACATCAATTAGTGTGGAGCAACTTGCTATCCAGGTTAGAGAGCTAGATTCAAACATTAGGTGGCATGACATTGAGAATACTCATCCACTATGCGTGTTGGACAAGGAATTCAGAAAGTCAATCAGGCTGTTCAAAAAAGTAATTGTACGCAGGAAGAGCACTGATAGGGAATGTGTAAAATATCTGCTTGATTTTGGGAAGAGAAGGTCTGTTCCAGATATTGTTAAGAAGCATGGTTCTTTGTTGGAAGATTCCTCAAGTGACAGGAAAAGATTTTGGCTGGAAGAACATTATGTTCCCTTGCATCTTATAAAGAATTTTGAGGACAAAAAAATTGCTCGCAAATCCAATGAAATGAAACCAGGAAAAGTTCTGGGGAATAGTGGATTTAACAAGAGATCTACCCAAAAACGGGGTTTTTCATATTTGTTTTCTAGGATGGAAAGGCCTACCTATCATCAGTGTTGCCACTGCAACAAAGACGTTCCAATCAGGGAAGCTGTGAGCTGCCAGTATTGTAATGGGTTCTTCCATAAGAGGCATGTCAGAAAATCTGGTGGCATTGCTGAGTGCACATATTCATGTCACAGATGCCTGGATGGGATGCATGTGAATTCTAATTCAAAAAGAAGAAAACTTGACCCAAAACAAGGGAAGGTGCAGTCACAAAAGGGTAGAAAGGTAGGGGTGGGTAGACCATCTAAGCAAAAAGGCAGTAAAAAGCCATTGAGTAAGAGGCGGCAAGATAAATCTCAAATTAATAAAAAGATCCTATCAAGTGTACCTCTTCGCCGTTCAGCAAGGAAGGCCAAATGCTTGTATGTGCAGAAGAAAAGGAATGTTGGACGCAAAAAAGGAAAGAAAAGTAAATCCAAGAAGATGACACCTAGCAAGCCCAAGGAAATTTCTTCTCATTCTAAGGAGACTACTAGATCTACTAGAAGTTCTTCTCGTCCTAAGGAAACTACTACCAGAACTACTGCTCATTCTATGGCAGCGATAACTTTTGAGCGCAAGAAAAGAACTCATGTATGTAGTAGTTACTGGCTCAATGGTCTTAGGTTGTCCACAAAGCCAAATGATGAACGAGTAATGCTGTTTAAGGAGAGAAAGCATCTTGCCCCCTCAGAAGAATTTTCTAGCACCTTTGATCAGCCTAAATGTCATCTTTGCTGTGCAGATGGGTGCACTTTGAATTATATTGCTTGTGAAATCTGTGGAGAGTGGTTTCATGGGGATGCTTTTGGACTCACTCTAGAGAATGTCGGACAACTTATTGGATTTAGGTGTCATGTTTGTCGCGATAGAATTGCACCAACTTGTCCCCACCAGAATAGTAATTCCTTGACTCACGCTGAAGTAGAATCTGCAACCGAGTGTGAAGAGGAACAACCTAATTCTGCTTCACTCCAGCCATTGAGTCAGGTTTGA 5280 0.4161 MEFVGKTVKKEVKGVGIISGTVKSFDSSSGFVEIVYEDGNSEELESSHVASLVQAKRRGRKPKKRRRVENKHDTGGSQGNNNDNDNIGENLGVSMLSDSEFRGVLDEGVSSSENLKVNGELDSGLNRSPGRENGAGENLTLGTGNIGNLNWSASSNGMKEVQRMESGCEEISKESIYINGNSSIIDCVKDGLDLNARLNEALDLNDGCSLHVNTEDGFGKNGCIDLNVDVSHETDASVDVSNLGCPAAEISKRECNFDLNVGVCDEAKEAQGDSAGDKLSDGGASFGEMGQSPKLGTDINQNSVQDDCVKRNLDGITNSTEFEGIDDFHGSACKDPSVSLIEEKEDGVYNGGAVAPDSLGVSNAISTRDCDSVEVCQEHKPSEAGIAITPECQNEPGSQCKQGSGRRKRRKLSDNLKSPPETVLRRSSRRASALKRDSSPITSNVTDDPLMSPGPSAITEEKTIVSGSEQCEQCSELPPKLQLPPSSQNLNLDDIPVLDLFSIYACLRSFSTMLFLSPFELEDFVTALKSVNPNMLFDNIHVSVLQTLRKHLEYLSNEGCQSASDCLRNLNWDLLDLVTWPIFMAEYVLIHSSGLKTGFDLKYLMFGGDYYKQPVHLKIEILQCLCDDMMEVEAIRLELNRRSLVVEADMSFDQSMYFDICKKRRALMDMSGSFSMSEEIVDVTNDWNSDECCLCKMDGNLICCDGCPAAFHSRCVGIASDHLPEGDWYCPECAIGRRNPWMKPQKSLRGADLLGIDPHGRLYFDSCGYLLVADSSDMRSLINYYHINDLHVVIEVLKAADAFYSSILMAICKHWGIPFNLNVAAGKVELSNQSASRSMHMKTEYSAPYPPSAPFPSSEAFLDKNQSADQRKYEETSTVPPIGEEFLKGERRLDSEIMTESPCVVSEVSADTTKMRLTTDDDPLTHGLYDSSRSDGALNQPGIVEKLHPVSHSSLRSSRSDTSHKMNLTSAGIGNTALAMSNGNRATSGMPWGIDYINYYSFARTASLVAVELTHKLPDKVNKSIEMSEEDLISEQAKIIIKKSLNFYWPSSQNVNAAAQKEKCGWCFTCKVENDDRDCLVNTVVMPVREASKSDVVGFQLKNQNAHLRDVIFYVLSLEDRLRGLLLGPWLSLHHSRNWRNNLLKASDVASIKSSLLTLESNLRPRALSADWWKHVDSAVTMGSACHIVASSRTSWRHSIGRKRIRCSDIESSASSNASGLGSYWWRGGRLSRHLFNWKVLPHSLVTKAARQAGCTKISGILYFENSDFSKRSKCAAWRAAVETSISVEQLAIQVRELDSNIRWHDIENTHPLCVLDKEFRKSIRLFKKVIVRRKSTDRECVKYLLDFGKRRSVPDIVKKHGSLLEDSSSDRKRFWLEEHYVPLHLIKNFEDKKIARKSNEMKPGKVLGNSGFNKRSTQKRGFSYLFSRMERPTYHQCCHCNKDVPIREAVSCQYCNGFFHKRHVRKSGGIAECTYSCHRCLDGMHVNSNSKRRKLDPKQGKVQSQKGRKVGVGRPSKQKGSKKPLSKRRQDKSQINKKILSSVPLRRSARKAKCLYVQKKRNVGRKKGKKSKSKKMTPSKPKEISSHSKETTRSTRSSSRPKETTTRTTAHSMAAITFERKKRTHVCSSYWLNGLRLSTKPNDERVMLFKERKHLAPSEEFSSTFDQPKCHLCCADGCTLNYIACEICGEWFHGDAFGLTLENVGQLIGFRCHVCRDRIAPTCPHQNSNSLTHAEVESATECEEEQPNSASLQPLSQV 1759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 40 91 - -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 1744 1759 - -
Mibi08g0523 1759 SMART PHD_3 1670 1717 IPR001965 -
Mibi08g0523 1759 SMART PHD_3 691 734 IPR001965 -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 74 91 - -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 1513 1527 - -
Mibi08g0523 1759 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 608 639 IPR028942 -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 1553 1577 - -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 434 450 - -
Mibi08g0523 1759 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1638 1722 IPR013083 -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 54 68 - -
Mibi08g0523 1759 CDD PHD1_AIRE 691 733 - -
Mibi08g0523 1759 SUPERFAMILY FYVE/PHD zinc finger 672 735 IPR011011 -
Mibi08g0523 1759 SUPERFAMILY FYVE/PHD zinc finger 1660 1719 IPR011011 -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 1489 1615 - -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 1599 1614 - -
Mibi08g0523 1759 Pfam DDT domain 497 550 IPR018501 -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 1578 1598 - -
Mibi08g0523 1759 ProSitePatterns Zinc finger PHD-type signature. 692 733 IPR019786 -
Mibi08g0523 1759 PANTHER PHD FINGER FAMILY PROTEIN 2 1726 - -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 1729 1759 - -
Mibi08g0523 1759 Pfam PHD-finger 692 734 IPR019787 -
Mibi08g0523 1759 SMART testlast3 494 554 IPR018501 -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 1489 1504 - -
Mibi08g0523 1759 ProSiteProfiles Zinc finger PHD-type profile. 689 736 IPR019787 -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 116 141 - -
Mibi08g0523 1759 MobiDBLite consensus disorder prediction 387 454 - -
Mibi08g0523 1759 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 683 749 IPR013083 -
Mibi08g0523 1759 ProSiteProfiles DDT domain profile. 494 554 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0523 Mibi-ChrMibi08 8485755 8496761 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0523 1 1731 PHD Transcription Factor Family AT5G12400 40.202 0.0 1112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mibi08g0523 DDT 1e-11 No_clan