Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0513 ATGGCTGTGAAGGAAACTTGTCTAGCCTTATATCGGTTAATAGACCTGGCCGATGGGTTGATAGAGCTGGTCGAAGAAGTCAAGATGCTCAAGATTGAATGTTTAAAGCTAAAGGCCAAAACAAAGGAACTTGTAAACTTACTCCGGCAAGTAGCAAAGGCCTATGATGAGCTCTACGAGCGACCAATACCGCGCATCATCGACAACACTGAACAAGTCCTTAAGAAGGCCCAAAGGCTGGTAGACAAATGTTGTAGGAACAACCTCATGAATCGACTTTTGTTCACCACCACTATCCAAGCCACAGATTTTCTCGAAATGTGGAAGCAGCTCGAGGATTGCTTCTCCAATTTACAATGGCTCCTCAAAACATCACTCTCCTCTGACGAATACTTTGTGGGTATCCCCCCAATTATCAAGGAGGAGCCCGCCTTGTGTTTAATATGGGAATACATAGCTACGTTGCTCAAGGGATTTTCCATGGAACAACGCTCAGATGCCGCGACTAGCTTGGTCATACTGACTCAAGACAATTACAGGTTTAGCAAGCTGGTCATCGAGGAGGGTGGTGTTCCGGCGCTGTTGAAATTGTTGGAGGAAGGGGACTTAAAGGGTCAAGAAAATGCGGCGGAAGCAATTGGGTTACTTGGGAAAGACGAAGAAAGTGTGCAACAGATTGTGGATGCAGGGGCTTGCACAGTGTTTGCGAAAATCCTCAAAGAAGGTGACATTAAGGTTCAGTCTATAGTGGCATGGGCTATATCTGAATTATCATATCATCACCTAAAGTGTGACCATCCCTTCTCAAACGACAATTGCATCTGCTCGCTGCTCAGGCATTTTGCCTTTAAGACCTTTCAAGAACAGAGTAAGTACATCCATGAAAATAAGGCAGAACATTAG 903 0.4496 MAVKETCLALYRLIDLADGLIELVEEVKMLKIECLKLKAKTKELVNLLRQVAKAYDELYERPIPRIIDNTEQVLKKAQRLVDKCCRNNLMNRLLFTTTIQATDFLEMWKQLEDCFSNLQWLLKTSLSSDEYFVGIPPIIKEEPALCLIWEYIATLLKGFSMEQRSDAATSLVILTQDNYRFSKLVIEEGGVPALLKLLEEGDLKGQENAAEAIGLLGKDEESVQQIVDAGACTVFAKILKEGDIKVQSIVAWAISELSYHHLKCDHPFSNDNCICSLLRHFAFKTFQEQSKYIHENKAEH 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0513 300 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 189 231 IPR000225 GO:0005515
Mibi08g0513 300 Coils Coil 20 57 - -
Mibi08g0513 300 Pfam Armadillo/beta-catenin-like repeat 182 214 IPR000225 GO:0005515
Mibi08g0513 300 Pfam Armadillo/beta-catenin-like repeat 220 258 IPR000225 GO:0005515
Mibi08g0513 300 SUPERFAMILY ARM repeat 148 281 IPR016024 -
Mibi08g0513 300 Gene3D - 153 297 IPR011989 -
Mibi08g0513 300 PANTHER ARMADILLO REPEAT ONLY 4 9 296 - -
Mibi08g0513 300 SMART arm_5 219 259 IPR000225 GO:0005515
Mibi08g0513 300 SMART arm_5 177 218 IPR000225 GO:0005515
Mibi08g0513 300 Coils Coil 67 87 - -
Mibi08g0513 300 Gene3D - 9 123 IPR036537 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0513 Mibi-ChrMibi08 8277565 8279585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0513 156 258 U-box Gene Family AT3G54850 32.039 4.21e-07 49.3