Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0501 ATGGAGATTGAGGATGCGAGTGGTGGAGGGAGTAATAGAGGGTGTAACCGACATAATGGGGCCGTATACTGTGGACTTGAGAGGGGAAGTTGTTTGGTGTGGGAGGATCTAACGGTGGTCATTCCTAACTTCGGCAAGGGGCCCACCAAGAGGTTGCTTAATGGACTCCATGGATATGCTGAGCCTGGTAGAATCATGGCTATTATGGGCCCTTCTGGTTCTGGCAAATCCACCTTGCTCGATTCTCTTGCAGGGAGGCTCTCAAAAAATGTGGTCATGACTGGAAATATATTTCTCAATGGAAAGAAGAAAAGACTAGATTACGGTGCAGTTGCTTATGTGACACAAGAGGATGTCTTGCTGGGAACTCTTACTGTCAGGGAAACAATATCTTATTCAGCACATTTACGCCTTCCTACAGAAATGACCAAAGAAGAAGTAAATGGGATTGTGGAGGGAACAATCATTGAAATGGGTCTGCAGGATTGTGCAGATAGGCTGATTGGTAACTGGCACTTGAGAGGCATAAGTGGAGGGGAGAAGAAAAGACTTAGTATTGCTCTTGAAATCCTCACAAGGCCTCGCTTGTTGTTTCTTGATGAACCCACCAGTGGCCTTGATAGTGCCTCTGCTTTCTTTGTTGTTCAAACTCTTAGAACTGTTGCTCGTGATGGACGTACTGTTATCTCCTCAATTCACCAGCCAAGTAGTGAAGTTTTTGCTCTCTTTGATGACCTTTTCTTGCTATCTGGTGGTGAAACAGTGTATTTTGGAGAAGCAAAGATGGCTGTAGAGTTCTTTGCAGAAGCAGGATTTCCATGTCCACGCAAGAGAAACCCTTCTGATCACTTCTTACGTTGTATCAATTCTGACTTTGACATTGTGACAGCCACTTTGAAGGGATCTCAAAGAATTCGGGATATTCCAAATTCATCAGATCCTTTCATGAACATGGCTACAGCACAGATTAAAGCTATGCTAGTTGAAAAATATAAGCGTTCAGTTTATGCTAGAAGGACAAAAGAGAGGATTCAAGAACTCTCGAACATTGAAGGAATAGAAGCTGAAACAAATAGTGGCAGTCAAGCTAAATGGTGGAAACAACTTGTAACGTTGACAATGAGATCATTTGTGAACATGAGTAGAGATGTGGGTTACTACTGGTTAAGGATTATAATATATGTCATAGTATCAATATGTGTGGGAACTATATACTTTGATATTGGGTATAGCTACACTTCAATCTTGGCTCGTGGAGCATGTGGAGCCTTTATATCAGGTTTTATGACATTTATGTCAATTGGAGGTTTCCCATCATTCATTGAAGAAATGAAGGTTTTCTATAAGGAAAGACATAATGGATACTATGGAGTTTTAGTATATATTCTATCCAATTTCCTTTCTGCTTTCCCATTCTTGGTTGCTGTTGCTCTTACTACTGGCACCATTACTTTCAACATGGTGAAATTCCGGCCTGGCTTCATTCACTTCCTGTTCTTCACTCTCAACATCTTTGGTTGCATAGCTGTGATAGAAAGCCTCATGATGGTTGTAGCTTCACTTGTTCCTAATTTCCTCATGGGAATAATTACTGGAGCTGGAATAATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTACTGAATGATCTTCCAAAGCCGGTTTGGCGCTACCCAATATCATATATTAGTTATGGTGCCTGGGCTATACAGGGTGCCTACAAGAATGACTTGCTTGGGCTTGAGTTTGAGCCTATGATACCTGGTGACAGCAAATTGAGGGGTGATTATATCATAACTCATATGTTGGGCATGAATTTGGATCACTCCAAGTGGTGGGACTTGGGAGCTCTGTATATCATTCTTGTAGGTTACAGAATTCTCTTCTTTATTGTTCTCAAGTTCAAGGAAAGAGCTTCCCCAGTATTTCAGAGACTCCATGCCAAGAGAACAATACAGGCACTTGAAAAGAGACCCTCTTTCAGGAAAATGCCAACTTTTCCTTCAAAGAGACATCAACCCCTCCATTCACTGTCTTCTCAAGAAGGTCTTAATTCCCCACTCAACTAG 2073 0.4173 MEIEDASGGGSNRGCNRHNGAVYCGLERGSCLVWEDLTVVIPNFGKGPTKRLLNGLHGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNIFLNGKKKRLDYGAVAYVTQEDVLLGTLTVRETISYSAHLRLPTEMTKEEVNGIVEGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRTVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIRDIPNSSDPFMNMATAQIKAMLVEKYKRSVYARRTKERIQELSNIEGIEAETNSGSQAKWWKQLVTLTMRSFVNMSRDVGYYWLRIIIYVIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERHNGYYGVLVYILSNFLSAFPFLVAVALTTGTITFNMVKFRPGFIHFLFFTLNIFGCIAVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLNDLPKPVWRYPISYISYGAWAIQGAYKNDLLGLEFEPMIPGDSKLRGDYIITHMLGMNLDHSKWWDLGALYIILVGYRILFFIVLKFKERASPVFQRLHAKRTIQALEKRPSFRKMPTFPSKRHQPLHSLSSQEGLNSPLN 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0501 690 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524|GO:0016887
Mibi08g0501 690 MobiDBLite consensus disorder prediction 673 690 - -
Mibi08g0501 690 Pfam ABC transporter 54 204 IPR003439 GO:0005524
Mibi08g0501 690 MobiDBLite consensus disorder prediction 664 690 - -
Mibi08g0501 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 265 IPR027417 -
Mibi08g0501 690 Pfam ABC-2 type transporter 233 349 IPR043926 GO:0140359
Mibi08g0501 690 Gene3D - 27 271 IPR027417 -
Mibi08g0501 690 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 32 276 IPR003439 GO:0005524
Mibi08g0501 690 SMART AAA_5 62 233 IPR003593 -
Mibi08g0501 690 CDD ABCG_EPDR 32 258 - -
Mibi08g0501 690 Pfam ABC-2 type transporter 368 577 IPR013525 GO:0016020|GO:0140359
Mibi08g0501 690 FunFam ABC transporter G family member 11 26 270 - -
Mibi08g0501 690 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 29 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0501 Mibi-ChrMibi08 8107069 8114602 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0501 48 245 Calmodulin-binding Proteins AT2G36910 30.622 1.53e-12 69.3