Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0467 ATGAATTTGTATCGGCAATTGTTTCAGACATGCACAGGAAATGTAAAAGGTGATAACTCGTCTTTGCTTCAGCAGTCCAGACGACCAAGCCTCACCTCTTTGCATATACCAGTAAGGTCAGTAGAGAGTGCATTTTCATCTTCTGCAAAGAAAGATGTTCTATCACTATCATGTCCAGGTTCCTCCCGAGGAGGACTGCCTCCAAGACAAAATTTAGCCAGAGTCAAGTCTTCCATGAGAGGGTTATTTCCTCAGAGGAGTTTAAAGGCAAAAGACTGTTCTCCAGATTGTGAAAGGGAAGTTCTCATTGTTTCTGATATTCCCTCATCAGACGGAACTTCGGATAAGCCTTCAACTTCAAGGTCCCTTTCTTTTAATAAGGTGTCGTTCCCTTCATCAACAAAAACATCAAATTCAGTACCAGTTACACCGATTGCAAATACGGTTGCAGAGATTGTGCATGGAAGTCATCTAGGAAGTAATCCTGACTTAAGTAAAATGGAAGCTAAGCATCGCATGGCTCGATCATTTTCAGTTCCAGTTAATATCAAATCATCTAGTTTAAAGCGAACAGGTTCTAGTGGTTTGATCCGAGTAATTTCAGCAAGACCACATCCTGCAGCTGTTAATGACCATTCAATTGATAGAGCATCACTGCCAGAGATCGCAATTGTAGATGCTACTGAGGACATTCCTGAAGAAGAAGCGGTTTGTAGGATTTGTTTTATGGAGCTGGGGGAAGGTGGGAATACCCTTAAGATGGAGTGCAGTTGTAGAGGAGACCTTGCGCTTGCTCACCAAGAGTGTGCAGTGAAGTGGTTTAGTATAAAAGGAAACAGAACATGCGATGTTTGCAATCAGGAAGTCCGAAATCTTCCAGTGACTCTATTGAAAATCCAAAGTCCTCAATCTACTGCTGGACGGTCATCAAATACCCCACAGCAGGCAGAAGTTACTTTTCACAGGATCTGGCAGGATGTACCAGTACTTGTCTTGGTCAGCATGTTAGCTTATTTTTGCTTTTTAGAGCAACTTCTGATTTCAGATATGGGTCCTCGTGCTCTTGCCATCTCGCTACCTTTTGCCTGCACGTTTGGCCTCGTTGCAGCTTTGCTTGCTTCCACCATGGTGAGCAGGGATTACATGTGGGCTTATGCTTGCTTCCAGTTTGCAATTGTCATCCTGCTGGCTCATGTATTTTACACTATACGTAAATATAACGGGGTTCTCTCGGTTTTGCTTTCTTCACTTGCTGGATTTGGGATTGCAATGATCGTAAATTTTCTGCTCCAGAAATTTATAAATTGGAGATTTAGAAGGCAGATACAATCTATTAATCAGACCCTAACAGAGCAGGAACAAGGACTGCATAATAGGCGTCAAAGGCAGCAGCAAGATCAACATCAATAA 1410 0.4255 MNLYRQLFQTCTGNVKGDNSSLLQQSRRPSLTSLHIPVRSVESAFSSSAKKDVLSLSCPGSSRGGLPPRQNLARVKSSMRGLFPQRSLKAKDCSPDCEREVLIVSDIPSSDGTSDKPSTSRSLSFNKVSFPSSTKTSNSVPVTPIANTVAEIVHGSHLGSNPDLSKMEAKHRMARSFSVPVNIKSSSLKRTGSSGLIRVISARPHPAAVNDHSIDRASLPEIAIVDATEDIPEEEAVCRICFMELGEGGNTLKMECSCRGDLALAHQECAVKWFSIKGNRTCDVCNQEVRNLPVTLLKIQSPQSTAGRSSNTPQQAEVTFHRIWQDVPVLVLVSMLAYFCFLEQLLISDMGPRALAISLPFACTFGLVAALLASTMVSRDYMWAYACFQFAIVILLAHVFYTIRKYNGVLSVLLSSLAGFGIAMIVNFLLQKFINWRFRRQIQSINQTLTEQEQGLHNRRQRQQQDQHQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0467 469 PANTHER OS02G0165000 PROTEIN 23 453 - -
Mibi08g0467 469 Pfam RING-variant domain 238 285 IPR011016 GO:0008270
Mibi08g0467 469 SMART ringv_2 237 286 IPR011016 GO:0008270
Mibi08g0467 469 CDD RING_CH-C4HC3_MARCH 238 286 - -
Mibi08g0467 469 MobiDBLite consensus disorder prediction 107 139 - -
Mibi08g0467 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 293 IPR013083 -
Mibi08g0467 469 SUPERFAMILY RING/U-box 234 289 - -
Mibi08g0467 469 ProSiteProfiles Zinc finger RING-CH-type profile. 230 292 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0467 Mibi-ChrMibi08 7513948 7527907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0467 221 292 C3H Transcription Factor Family AT2G37950 45.205 1.70e-13 67.8