Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0438 ATGGCTGCTTCGCCTATTGAGTACCGTTCAGCTGGAGCCATTGATCAGTATGAGATGCATGAGCCTATTGGCGATGGATCTTACAGTCGGGTTTACAGAGGTATATTCAAAGAAACCAGAAAAGAAGTTGCTCTGAAGAAGCTTCTTGTGGAAGCTGAAACTGTTCAAGAGCTCCCAAAGGAAGCCATTCGGGAAATTGAAATTCTGCAAAAACTCAAACATCCAAATGTGATTGACTTCAAAGGGATTCTGCATTCATCAGGCCCTGATTTAGACAAGCCTGGTAAGGTTTTCATTGTTATTTCCACATTTGGTTAG 318 0.4214 MAASPIEYRSAGAIDQYEMHEPIGDGSYSRVYRGIFKETRKEVALKKLLVEAETVQELPKEAIREIEILQKLKHPNVIDFKGILHSSGPDLDKPGKVFIVISTFG 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0438 105 Pfam Protein kinase domain 17 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0438 105 Gene3D Phosphorylase Kinase; domain 1 3 104 - -
Mibi08g0438 105 PANTHER CELL DIVISION PROTEIN KINASE 15 101 - -
Mibi08g0438 105 ProSiteProfiles Protein kinase domain profile. 17 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0438 105 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Mibi08g0438 105 SUPERFAMILY Protein kinase-like (PK-like) 13 87 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0438 Mibi-ChrMibi08 6924382 6925679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0438 13 96 Core Cell Cycle Gene Families AT5G10270 45.238 1.42e-13 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi08g0438 Pkinase 7.5e-15 CL0016