Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0437 ATGAATGTACTTCACCGTGACATAAAAGATCATAATATTCTGATAAACAATGAAGGCATTCTAAAAATTGCGGATTTTGGACTGGCAAAAGAAGTCTCTGATATCTGTGGGGATGTGATACATACTAATATGGTTGTGACATTATGGTACAGGTCCCCAGAGTTGCTGCTAGGTGCATCTCATTATGGCACAGCAGTTGATATTTGGTCTGCCGGGTGCCTCTTTGCCGAGTTTCTGAACAATGGAGAACATATTTTCCGTGGGGAGGATGAGCTCACTCTGTTTGCAAACTATATGTGGAATACCTCTGCTATATGTTCCATAGCTGTAAAACTTTGGGCTGCAGCAACTAAGTTTTTTGGGGCTTCTTTGCGTGAAGTTTATGAGACAAATTTCCCTGGGGTTTCCAAGTTACCTCGTTTTAAACCGACTAGCTCAACACATTATGTGCGAGGTGATAGTGATGAGGATGAGGATAGGGATGAGGATGAGTATGAGGAGGACGATCAAGCATTTGTTAGCCCTCAATGGACACCACTCCAAGAAACAGATCATGGCTCTGAATCAAATACCAGTCCTTAG 582 0.4244 MNVLHRDIKDHNILINNEGILKIADFGLAKEVSDICGDVIHTNMVVTLWYRSPELLLGASHYGTAVDIWSAGCLFAEFLNNGEHIFRGEDELTLFANYMWNTSAICSIAVKLWAAATKFFGASLREVYETNFPGVSKLPRFKPTSSTHYVRGDSDEDEDRDEDEYEEDDQAFVSPQWTPLQETDHGSESNTSP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0437 193 SUPERFAMILY Protein kinase-like (PK-like) 1 101 IPR011009 -
Mibi08g0437 193 Pfam Protein kinase domain 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0437 193 MobiDBLite consensus disorder prediction 174 193 - -
Mibi08g0437 193 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0437 193 Gene3D Transferase(Phosphotransferase) domain 1 2 98 - -
Mibi08g0437 193 PANTHER CELL DIVISION PROTEIN KINASE 2 121 - -
Mibi08g0437 193 MobiDBLite consensus disorder prediction 156 170 - -
Mibi08g0437 193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 3 15 IPR008271 GO:0004672|GO:0006468
Mibi08g0437 193 MobiDBLite consensus disorder prediction 143 193 - -
Mibi08g0437 193 SMART serkin_6 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0437 Mibi-ChrMibi08 6916516 6919914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0437 3 151 Core Cell Cycle Gene Families AT5G64960 42.675 4.76e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi08g0437 Pkinase 5.9e-28 CL0016