Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0434 ATGGCAACTAGCAGTAATAGATCTCACAAGTCTGAGATTTTAAATTTAGTACCTTCACTGTTACACCTTTGTTCTCAACATTTTAGCCTCCTCTTCAGATTCCCCTACGTCATTTTCTCCCTTTGTTTATTTGTACCTACCGGCTACCGCTTTTCTTTTGTCGTCTTCCTCTCCCATTCCATGCCAATTCCATGTCTTTTTTTTAATTGGTGGGGTTGTCTTGAAATTTGGTGGGGTTGTCTTAGAATTCGTAGAAACTTCTGGCAGATTCCTTATAAGGGGAAAGGAGTTGAACTCTATCTGAAAGCTAAGAAGTCATTCAAAATGAGTCAATCTAAAATCAAGCGTCGTATAGGTAAATATGAGGTGGGAAGGACCATTGGTGAGGGAACATTTGCAAAAGTGAAATTTGCTAGGAACTCTGAGACTGGGGATGCTGTGGCTATCAAAATTCTGGAGAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAACAGATCAGGCGGGAAATAGCAACAATGAAGTTAGTCAAGCATCCAAATGTTGTCCGATTATTTGAGGTAATGGGGAGCAGGACAAAAATATATATAGTTTTGGAGTTTGTGACTGGAGGAGAGCTCTTTGACAAAATTGTAAACAATGGAAGGATGAGTGAAAAAGAAGCACGTAGTTATTTCCAGCAGCTTATAAATGCAGTTGATTATTGCCATAGCAGAGGTGTATACCACAGAGATCTCAAGCCAGAAAATTTGCTGCTAGATGCTTATGGCCAGCTTAAAGTTTCTGATTTTGGGTTGAGTGCACTATCACAACAAATCAAGGATGATGGACTGCTTCATACTACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTGATGATGGAGGTTATGATGGAGCAACTGCAGATGTGTGGTCTTGTGGAGTAATTCTCTTTGTATTACTTGCAGGTTACTTGCCTTTTGATGACCCTAATCTTATGAACCTGTATAAAAAAATCTCTGCTGCTGAATTTACTTGTCCACCATGGATTTCATTCAGTGCCAGGAAATTGATAACTCGAATTTTGGATCCTAACCCCATGACTCGTATCACTATGTCTGAAATCTTGGGCGATGAATGGTTTAAGAAAGATTATAAACCTCCAGTTTTTGAGGAGACAGGGGAAACCAACCTTGATGACATTGAAGCTGTCTTTAGAGATTCGGAAGAACACCTTGTAACAGAGAAGAAGGAGAAGATGGAAGAACAGCCTACAGCCATCAATGCATTTGAATTAATTTCCATGTCCAAAGGACTAAACCTCGAAAACTTGTTTGATATAGAGCAGGCATTGAAAAGAGAAACAAGGTTCACATCAACATGCCCTGCAAAGGAGATAGTTAACAAGATCGAAGAGGCCGTAAAGCCTCTTGGTTTTGATGTGCAGAAGAAAAACTACAAGATGAGGCTTGAGAATGTTAAAGCAGGAAGGAAGGGAAATCTTAATATTGCCACTGAGATATTTCAAGTTGCACCTTCTCTTCACATGGTTGAGGTGAGGAAAGCAAAAGGTGATACGTTGGAGTTTCACAAGTTCTACAAAAATCTTTCAACAAGGCTTGATGATGTTGTTTGGAAAGCAGAGGAGGATACTCAGGAAACGGAAGTGAAATGA 1659 0.3996 MATSSNRSHKSEILNLVPSLLHLCSQHFSLLFRFPYVIFSLCLFVPTGYRFSFVVFLSHSMPIPCLFFNWWGCLEIWWGCLRIRRNFWQIPYKGKGVELYLKAKKSFKMSQSKIKRRIGKYEVGRTIGEGTFAKVKFARNSETGDAVAIKILEKEKVLKHKMAEQIRREIATMKLVKHPNVVRLFEVMGSRTKIYIVLEFVTGGELFDKIVNNGRMSEKEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGQLKVSDFGLSALSQQIKDDGLLHTTCGTPNYVAPEVLDDGGYDGATADVWSCGVILFVLLAGYLPFDDPNLMNLYKKISAAEFTCPPWISFSARKLITRILDPNPMTRITMSEILGDEWFKKDYKPPVFEETGETNLDDIEAVFRDSEEHLVTEKKEKMEEQPTAINAFELISMSKGLNLENLFDIEQALKRETRFTSTCPAKEIVNKIEEAVKPLGFDVQKKNYKMRLENVKAGRKGNLNIATEIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTRLDDVVWKAEEDTQETEVK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0434 552 Gene3D Kinase associated domain 1, KA1 416 541 - -
Mibi08g0434 552 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 111 530 - -
Mibi08g0434 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Mibi08g0434 552 FunFam Non-specific serine/threonine protein kinase 114 419 - -
Mibi08g0434 552 CDD STKc_SnRK3 120 375 - -
Mibi08g0434 552 Pfam NAF domain 419 478 IPR004041 GO:0007165
Mibi08g0434 552 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Mibi08g0434 552 FunFam Non-specific serine/threonine protein kinase 112 200 - -
Mibi08g0434 552 CDD CIPK_C 423 537 - -
Mibi08g0434 552 Gene3D Phosphorylase Kinase; domain 1 110 200 - -
Mibi08g0434 552 Gene3D Transferase(Phosphotransferase) domain 1 201 383 - -
Mibi08g0434 552 ProSiteProfiles Protein kinase domain profile. 121 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0434 552 SMART serkin_6 121 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0434 552 Pfam Protein kinase domain 121 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0434 552 ProSiteProfiles NAF domain profile. 417 441 IPR018451 GO:0007165
Mibi08g0434 552 FunFam Non-specific serine/threonine protein kinase 416 541 - -
Mibi08g0434 552 SUPERFAMILY Protein kinase-like (PK-like) 117 392 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0434 Mibi-ChrMibi08 6862906 6869590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0434 111 522 CBL-interacting serine-threonine protein kinases AT2G26980 77.670 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi08g0434 Pkinase 3.4e-73 CL0016