Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0433 ATGGGAAATTCCTGTAGAAAACCCATTGCTCATGTCTCTTCCTCGAACATTTCTGGGAAGGGGAAGACTCAAAGTGACACAAGTAAGAATTCAGACTTTTCAGAACGAAAAGCAGCATCGCATGCTTCAAAACCAACTATAAGCAGACCCATATCTTCTACTCTTAAATCCTTCAGCTTCAATGATCTAAAAGAAGCCACTAGGAATTTCAGACAAGAAAACTTAATTGGGGAGGGAGGTTTTGGGTTTGTTTATAAGGGATGGATCAATGAGAACTCCTTTGCTCCCACAAGACCGGGGAGCGGAATCATGGTGGCCATCAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTATCTAGGTGAACTTCACCATGAGAATGTGGTTAAACTTATTGGTTATTGCTCAGACGCTAAAAACAGGCTTCTTGTTTATGAATTTATGCAGAAAGGAAGTTTGGAGACTCATTTATTCAGAAAAGGAGTGCAGCCTGTATCCTGGACTTCACGAATAAATATTGCTGTCGGCGTTGCTAGAGGATTAGCTTTTTTGCATACCTTGGATGCCAATGTTATCTACCGCGACTTAAAGGCTTCGAATGTATTACTTGATTCGAACTTCAACCCTAAGCTTTCTGATTTCGGTTTGGCAAGAGATGGTCCTACCGGAGATAACACTCACGTTTCAACCCAAATTATTGGAACTCGAGGTTATGCCGCACCAGAGTATGTAGCTACAGGTCACTTGACTCTAAGGAGTGATGTATACAGCTTTGGCGTTGTCTTGTTGGAGTTACTGACAGGGAGAAGGGTGGTGGAGGTTGATAAACCCGGAAATGTGAGGGAAACTCTGGTTGATTGGGCGATGCCATTTCTCAAAGATGGAAAGCGGATTTCAAGAATTATGGATATGAGGTTAGGTGGTCAGTACTCAAAAAAAGGAGCTCAAGCTGCAGCTGCACTTGCATATAAATGCCTAAATGCAGATCCTAAAAATAGACCAACCATGATACATGTTGTAGCCACCTTGGAAGAACTCAATTCTTCAAACACTATAATCCCGAAGACCCCACCACGGTCTGAGTCTGGGAACAATACCGTCAAGCATGCTCGTCATTCCCTAAAGTCAATGAGAAATACAAGATGA 1170 0.4248 MGNSCRKPIAHVSSSNISGKGKTQSDTSKNSDFSERKAASHASKPTISRPISSTLKSFSFNDLKEATRNFRQENLIGEGGFGFVYKGWINENSFAPTRPGSGIMVAIKKLKPESFQGHKEWLAEVNYLGELHHENVVKLIGYCSDAKNRLLVYEFMQKGSLETHLFRKGVQPVSWTSRINIAVGVARGLAFLHTLDANVIYRDLKASNVLLDSNFNPKLSDFGLARDGPTGDNTHVSTQIIGTRGYAAPEYVATGHLTLRSDVYSFGVVLLELLTGRRVVEVDKPGNVRETLVDWAMPFLKDGKRISRIMDMRLGGQYSKKGAQAAAALAYKCLNADPKNRPTMIHVVATLEELNSSNTIIPKTPPRSESGNNTVKHARHSLKSMRNTR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0433 389 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0433 389 Gene3D Transferase(Phosphotransferase) domain 1 156 367 - -
Mibi08g0433 389 FunFam Serine/threonine-protein kinase BIK1 37 155 - -
Mibi08g0433 389 SUPERFAMILY Protein kinase-like (PK-like) 45 352 IPR011009 -
Mibi08g0433 389 MobiDBLite consensus disorder prediction 358 378 - -
Mibi08g0433 389 MobiDBLite consensus disorder prediction 1 48 - -
Mibi08g0433 389 Pfam Protein kinase domain 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0433 389 MobiDBLite consensus disorder prediction 358 389 - -
Mibi08g0433 389 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 364 - -
Mibi08g0433 389 PANTHER OS01G0588500 PROTEIN-RELATED 35 355 - -
Mibi08g0433 389 Gene3D Phosphorylase Kinase; domain 1 46 155 - -
Mibi08g0433 389 MobiDBLite consensus disorder prediction 8 28 - -
Mibi08g0433 389 CDD STKc_IRAK 76 354 - -
Mibi08g0433 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mibi08g0433 389 SMART serkin_6 70 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0433 389 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0433 Mibi-ChrMibi08 6825840 6829165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0433 56 351 Glycoside Hydrolase AT3G07070 50.836 3.76e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi08g0433 Pkinase 9.7e-49 CL0016