Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0427 ATGGGTGGAGGTGATGGTCCAATGATGCCTAATGGTCGGCATTCTGTGTTTGAAATTAAAGAAGAAAATCTCCAAGGTAATGTTGGAGGAGAAGCACATTTGAAGAAAGGTCCTTGGACATCAGCAGAGGATGCTATTTTAATAGATTATGTCCAAAAACATGGAGAAGGAAATTGGAATGCAGTTCAGAAAAACTCAGGCCTTGCCCGCTGTGGGAAAAGCTGCCGTCTACGATGGGCAAATCACTTGAGGCCAGAATTAAAAAAGGGTGCATTTACTCAAGAGGAGGAGAATCGAATCATAGATCTTCATGCTACGTGGGGAAACAAATGGGCTAAAATGGCAACAGAGTTGCCTGGACGTACAGATAATGAGATAAAGAATTACTGGAACACTAGAGTTAAGAGAATGCAACGAGCTGGGTTACCGCTTTATCCTCCTGATGTATACCAGCGGGTACGCAGTCAAGAAAATCCGAATGTGGGTTCTTTGATGAGTGGAACCGGCCAGCTCTCTGATATCCCACAAGATGACATCTTCAAGGTCCCTGACCTAGATTTCAAAAATATGAAATACTGTCATGCTTATCTCCCATCTGGTATTTTAGATGGTCATGGTAGCAGCCCGTTTCAACATGATGTAAACCAACCGCTTAGGGATCTCGTATTGTTGGATCCTAGGGAGCCAGATATGCTTTATAATGGATTGGACCATGATAGTGGCTATTTGATCCCGGGGCTTGACAAATATGTGGATTATCCTGCGGAGCCATCTCCTTTGATGCCATCTCCAAGCAATCCATCCCTTGACGCCATGAATCTGTTTCATGGTGTTAATCTCCATGGCAGCCATGCCACATCAAATGGCACTCTCCCTCCTTCATTGGCCGTATCCGAGGCAATGATGGTGGAGCTCCCTTCACTCCAATATCTAGAAATTCAACAAGGTAGCTGGGACGCAAATGCATCTCCACTTCCTTCACTGGAGTCTGTTGATACATTGGTTCACTTTTCTCCAGTTGAACAGTATCATCAGTCATGTCCTGTTACTCCACATAGTAGTGGTTTGTTAGAATCAATAATTGATCATACCAGGTTTCCCAAGGTCTCAGATAATAATGGTTCGTGGGAGTCTACCGATAGTTTCATACTGGATATGGCTGAACATGAGGTAGAATGGGACCAACATGGGGACATAAATTCACCCTTAGGTCACACTTGCTTCACTGTTAATGACCCCCACTTCATTGAACACACTAGAGGTCCTGAAATGAGGCAGGAAGCGATTTCTCAGGATCCACCGCCCATTCCCAAAAGCCAAGAAACTCCTAGTCAGATAGACATAACAAGGCCAGATGCTTTGTTTGACTGCTATTGGTGCGGGCATAATAATGGTTCCTGCTAG 1404 0.4444 MGGGDGPMMPNGRHSVFEIKEENLQGNVGGEAHLKKGPWTSAEDAILIDYVQKHGEGNWNAVQKNSGLARCGKSCRLRWANHLRPELKKGAFTQEEENRIIDLHATWGNKWAKMATELPGRTDNEIKNYWNTRVKRMQRAGLPLYPPDVYQRVRSQENPNVGSLMSGTGQLSDIPQDDIFKVPDLDFKNMKYCHAYLPSGILDGHGSSPFQHDVNQPLRDLVLLDPREPDMLYNGLDHDSGYLIPGLDKYVDYPAEPSPLMPSPSNPSLDAMNLFHGVNLHGSHATSNGTLPPSLAVSEAMMVELPSLQYLEIQQGSWDANASPLPSLESVDTLVHFSPVEQYHQSCPVTPHSSGLLESIIDHTRFPKVSDNNGSWESTDSFILDMAEHEVEWDQHGDINSPLGHTCFTVNDPHFIEHTRGPEMRQEAISQDPPPIPKSQETPSQIDITRPDALFDCYWCGHNNGSC 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0427 467 Gene3D - 91 158 - -
Mibi08g0427 467 CDD SANT 38 83 IPR001005 -
Mibi08g0427 467 ProSiteProfiles Myb-like domain profile. 84 134 IPR001005 -
Mibi08g0427 467 CDD SANT 91 132 IPR001005 -
Mibi08g0427 467 Pfam Myb-like DNA-binding domain 39 99 - -
Mibi08g0427 467 Gene3D - 35 88 - -
Mibi08g0427 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 83 IPR017930 -
Mibi08g0427 467 SMART sant 35 85 IPR001005 -
Mibi08g0427 467 SMART sant 88 136 IPR001005 -
Mibi08g0427 467 MobiDBLite consensus disorder prediction 422 444 - -
Mibi08g0427 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 138 IPR017930 -
Mibi08g0427 467 SUPERFAMILY Homeodomain-like 34 130 IPR009057 -
Mibi08g0427 467 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 28 459 - -
Mibi08g0427 467 FunFam MYB-related transcription factor 35 88 - -
Mibi08g0427 467 ProSiteProfiles Myb-like domain profile. 31 83 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0427 Mibi-ChrMibi08 6750996 6754953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0427 34 465 MYB Transcription Factor Family AT5G06100 36.786 3.63e-72 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g0427 Myb_DNA-bind_6 2.7e-14 CL0123