Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0372 ATGGCATTCACAGTAGAGAGGTGTGATAATAATGGGACAGAAGCAGCAATGGTGTTCATGGAAGACAAGTCCTCGCCGGCACCGTTTCTGACAAAGACATATAAGCTGGTGGATGATCCTCTCACAGATCACATTGTGTCTTGGGCTTCTGATGAGTCCTCTTTTGTTGTGTGGAGACCTCCTGAGTTTGCAAGAGATCTTCTTCCCAATTACTTCAAACACAACAACTTCTCTAGCTTCGTTCGCCAGCTCAATACCTATGGTTTCAAGAAGGTAGTAGCAGATAGGTGGGAATTTGCAAATGAGTATTTCAGGAAAGGAGCTAAGCATCTTCTTTGTGAAATCCACAGAAGAAAAAGCCCCCACCACCAACAAAACCTTCATGAACAGCAAACTAATCTTCAGAGTCTCTTTTGGAACACAGAAACTACTACTTGTAGTCCATTATTAATGCCACCATCACCTTATTATTCTCCAACTAAACCTGCAATTACAAGAAGAGGACCTTCATCATCATCAGGAACCAATACTACTACTGCTACTCATGAAGTTCTAAGAGCACTTTCAGAAGATAATCAGAGACTGAGGAGGAAGAACTTGATGCTCTTATCTGAACTCACTCACATGAAGACTCTCTATAATGACATTATATACTTCATTCAGAATCATGTCAAACCAGTGGATCATAATGATAATGATAATGATCCTCATCATATTCCCAAGCTGGTTGAATTGGATTCTTCATTTCAAACTGATGCTAATAAGTTGGATAATATTTCATCAGCTGATGATGGTTCTGTGAAGCTATTTGGGGTCCCACTTAGTAGCAGAAAGAGGTTGCATTCTGAATATACTATGGATGAAGAAGAATTTGTTGAGTGTGTTAATTAA 891 0.3951 MAFTVERCDNNGTEAAMVFMEDKSSPAPFLTKTYKLVDDPLTDHIVSWASDESSFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFRKGAKHLLCEIHRRKSPHHQQNLHEQQTNLQSLFWNTETTTCSPLLMPPSPYYSPTKPAITRRGPSSSSGTNTTTATHEVLRALSEDNQRLRRKNLMLLSELTHMKTLYNDIIYFIQNHVKPVDHNDNDNDPHHIPKLVELDSSFQTDANKLDNISSADDGSVKLFGVPLSSRKRLHSEYTMDEEEFVECVN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0372 296 Coils Coil 185 205 - -
Mibi08g0372 296 Pfam HSF-type DNA-binding 29 118 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi08g0372 296 FunFam Heat stress transcription factor B-4 21 119 - -
Mibi08g0372 296 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 23 236 IPR027725 -
Mibi08g0372 296 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi08g0372 296 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi08g0372 296 PRINTS Heat shock factor (HSF) domain signature 29 52 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi08g0372 296 SUPERFAMILY "Winged helix" DNA-binding domain 24 118 IPR036390 -
Mibi08g0372 296 ProSitePatterns HSF-type DNA-binding domain signature. 68 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi08g0372 296 Gene3D - 21 119 IPR036388 -
Mibi08g0372 296 SMART hsfneu3 25 118 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0372 Mibi-ChrMibi08 5582625 5584122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0372 17 232 HSF AT1G46264 57.466 1.44e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi08g0372 HSF_DNA-bind 3.5e-32 CL0123