Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0360 ATGGATGATTCAGGTGGTGCCTTTGCTGACTGGGCAACCACATCGACCTCTGCCATAGCCGCACCGGCCGATCTCTCCTTGGGATTCAATGCGGGCCCCACCTCCGCCGCCGCCGCCGCCGCCAATAATCCCGCCGGGATATGGCCCGGCAGCGCTACAAGAACATCGTCATCAATCAACTTCGGACACTCCGAAATGGGCATGTTACCCCTCAGAGATGTCTTCCTCGTCGCCCCCTACCACCACCACCACCACCAACACCAAAACGACGTCGTTTTGCCCGATCCCCATACCGTCGGCGTCATCCCCCTCCTGACAAACGACACAACAAACATGCTCAACCTCGGAAGTTACAACAACAACAACAACAAGAATTACAGCCATCATCATCACAATCATCATCATAGGAGTTGTAGTGGTAGTGGTAGTGGTGGTGGTGGTGGAGGGATTCAGCTGTGGCAGGAGCATAATAACAACGGTGGGGCCAGCTCAGGAGGGGGGATGAGCTCATCGGGGGCGATGACGTGTCAGGATTGTGGGAATCAGGCGAAGAAGGATTGTAGTCATAGGAGGTGTAGGACTTGTTGTAAGAGCAGAGGTTTTGATTGCCCTACTCACGTGAAGAGCACGTGGGTACCCGCCGCCCGCCGCAGGGAGCGCCAGCTCATGGCCTCCTCCGGCGCTGCCGCCGCCTCTGCCGGCGGCGCCACGTCAGTGTCCAAGAAACCTAGGCTTGTTAACTCTCAGACCACCACCACTTCTCGTACTTCCACTTCCAATACAACCCCTCCAAGAAGCTTCGACACTAGTTCAAGCCATCAAGATGCGAGTTTCAAAGGGTCATTGCCGGGGCAAGTGAGAGCGCCGGCGGTGTTCAAGTGTGTTCGTGTGACGGCGGTGGATGATGGCGGAGGTGGTGGTGGTGGTGGAGGGGAAGATGAGTTTGCTTATCAAGCGGTTGTGAAGATTGGTGGGCATGTGTTTAAAGGGTTTTTGTATGATCAAGGTGTTGAGAATGGTGATGGATATCCTAATCTATCTGAGTTGCATTTGGGCGGCGGCGGCGGAGGAAATGGTGGTGCTGGTGGCGGAAGGAATGGTGCTACTTCTTCATCACCTATGTTGGATCCTTCTGATGTGTATGCTGCTGCTGCTGTTTCAGGTGGGGCTTTACTTGCTGGTTCAAGTTATGGTAATGCCATGAATTGA 1209 0.5467 MDDSGGAFADWATTSTSAIAAPADLSLGFNAGPTSAAAAAANNPAGIWPGSATRTSSSINFGHSEMGMLPLRDVFLVAPYHHHHHQHQNDVVLPDPHTVGVIPLLTNDTTNMLNLGSYNNNNNKNYSHHHHNHHHRSCSGSGSGGGGGGIQLWQEHNNNGGASSGGGMSSSGAMTCQDCGNQAKKDCSHRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMASSGAAAASAGGATSVSKKPRLVNSQTTTTSRTSTSNTTPPRSFDTSSSHQDASFKGSLPGQVRAPAVFKCVRVTAVDDGGGGGGGGGEDEFAYQAVVKIGGHVFKGFLYDQGVENGDGYPNLSELHLGGGGGGNGGAGGGRNGATSSSPMLDPSDVYAAAAVSGGALLAGSSYGNAMN 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0360 402 MobiDBLite consensus disorder prediction 222 282 - -
Mibi08g0360 402 MobiDBLite consensus disorder prediction 354 373 - -
Mibi08g0360 402 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 175 217 IPR006510 -
Mibi08g0360 402 MobiDBLite consensus disorder prediction 126 171 - -
Mibi08g0360 402 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 282 337 IPR006511 -
Mibi08g0360 402 MobiDBLite consensus disorder prediction 152 171 - -
Mibi08g0360 402 MobiDBLite consensus disorder prediction 241 279 - -
Mibi08g0360 402 Pfam Domain of unknown function (DUF702) 173 338 - -
Mibi08g0360 402 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 109 384 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0360 Mibi-ChrMibi08 5414744 5417074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0360 6 380 C2H2 Transcription Factor Family AT5G12330 48.635 3.22e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mibi08g0360 DUF702 1.9e-59 No_clan