Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0354 ATGACCGTCATGGAAGCCAAGAATGCCATTGAAATCAAAAAATCAGGTGAATTGCAATCAGAAGAGAATAACGTTTCTATGGAGAAAAATAAGAAAAGGAGGCTAAAAACACCTGCCCAGGTGATGGCCCTGGAAAAATTTTATGATGAGCACAAATATCCCACAGAAGAAATGAAATCAGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTATCTGGATGGTTTTGCCACAGACGGTTAAAAGAGAAAAGATTGTTGAAAGATGAAACATGTGCTAATGGGCGACAAGATCGCTCAAGTGGTGTCCTCCAGGACCATGTAAGTGGACTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAAGTATCTCGATCTGAAAGAGGTTGAGAGTCATGGCCAATATGGCAATGACTTTTCTGTTGCAGATATGATGTATGATCGTAATAGACACTATAATGAAGATGATGATGATGGAATGGATGACACATCTTCTGAGAGTAGCTCATCTTTACAAGATCAGTTGTTCTCTCAAGGTCAGGATCCATACAATATGGAGCCTTCTAGATATCTGATTCCTAACAGAGCTCTGCCACCTTTAGCTCCCAAAGCTGCAATTAATGTTGGGTATAAACCATCAGGATATTTGAAAGTCAAGGGTGATATAGAAAATGCTGCAATCACTGCTGTCAGGAAGCAATTAGGAAGAAACTATCTGGAGGATGGTCCACTGCTTGGTGTAGAGTTTGATCCAGTTCCTCCGGGGGCGTTTGAGTACCAAATCGCAGATCCAGTTGATGAGTCATTCCACACTGTGAATCCTTCTCTTGCCAGTCCTCCAGAAATTTCTGCTGTGAAAAGGCAACCTGCCCTTAACTACAGGCATGACTCCAAATATAGTTCCCATGATTTACATATGGAAGTAGGAGATATTGGCTCCTTTCATGACACCGATTTGCTGGATAAAAAACCCCGCCGGCCCAAGCAAGGCCGGACGTTTCAGAGTAACACCAATTATTTACCTCGCAGGAACTCCTCCCTGGAGTTGTATGAAGATCCCACTGGAGCAGCGCCTTCTTATAATACAACGGTCTTTAAGCATGGTGAAGGGATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTTTGAAGGGGACATTATGGTTAACCAGACAGATGCACTTCTGCATTGCTATGATAATGTCAATCCAAAGAAAATTCGGAGGAGTGAACATGTAAAATTTAAGCCTTCAAATTCATTGAAAAATTCTCGCACTTCTCTCGATACTGAAGAAAGAGGATTATTTTCAAGGATAGCAAAGGAAGAGAAGTTTAGTGGAGACAAGAAGGCAAGAAAACAATATCATGATTCCGAGAGAATAAGGATTCTTCCAAATGAAACCATGATTGCAAAAAGAGTTAAAGATGATCTTCCTCACCAACACAATCTGAAACATGCACTAGTAGCTGAGATGCAACCTCAGAAAAATCGGAGGTCTGCAACACAGATACTTTCTAGCTTTAGTGAGGATGAAACCGCTGAAACTAGTTCTTCGATGGACTAA 1578 0.4132 MTVMEAKNAIEIKKSGELQSEENNVSMEKNKKRRLKTPAQVMALEKFYDEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKEKRLLKDETCANGRQDRSSGVLQDHVSGLGQDSCGSTKHGDYKYLDLKEVESHGQYGNDFSVADMMYDRNRHYNEDDDDGMDDTSSESSSSLQDQLFSQGQDPYNMEPSRYLIPNRALPPLAPKAAINVGYKPSGYLKVKGDIENAAITAVRKQLGRNYLEDGPLLGVEFDPVPPGAFEYQIADPVDESFHTVNPSLASPPEISAVKRQPALNYRHDSKYSSHDLHMEVGDIGSFHDTDLLDKKPRRPKQGRTFQSNTNYLPRRNSSLELYEDPTGAAPSYNTTVFKHGEGMRSDSASNHSDHFEGDIMVNQTDALLHCYDNVNPKKIRRSEHVKFKPSNSLKNSRTSLDTEERGLFSRIAKEEKFSGDKKARKQYHDSERIRILPNETMIAKRVKDDLPHQHNLKHALVAEMQPQKNRRSATQILSSFSEDETAETSSSMD 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0354 525 MobiDBLite consensus disorder prediction 97 116 - -
Mibi08g0354 525 MobiDBLite consensus disorder prediction 94 116 - -
Mibi08g0354 525 Pfam Homeodomain 31 86 IPR001356 GO:0003677
Mibi08g0354 525 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Mibi08g0354 525 MobiDBLite consensus disorder prediction 499 525 - -
Mibi08g0354 525 Gene3D - 19 103 - -
Mibi08g0354 525 SUPERFAMILY Homeodomain-like 26 90 IPR009057 -
Mibi08g0354 525 MobiDBLite consensus disorder prediction 494 525 - -
Mibi08g0354 525 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 13 525 - -
Mibi08g0354 525 CDD homeodomain 31 86 IPR001356 GO:0003677
Mibi08g0354 525 MobiDBLite consensus disorder prediction 15 36 - -
Mibi08g0354 525 MobiDBLite consensus disorder prediction 321 347 - -
Mibi08g0354 525 SMART HOX_1 29 91 IPR001356 GO:0003677
Mibi08g0354 525 MobiDBLite consensus disorder prediction 154 190 - -
Mibi08g0354 525 MobiDBLite consensus disorder prediction 168 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0354 Mibi-ChrMibi08 5289782 5296162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0354 15 525 Homeobox Transcription Factor Family AT4G03250 40.296 3.11e-79 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mibi08g0354 Homeodomain 5.2e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g0354 08 5289782 5296162 Mibi08g0354 08 5289782 5296162 ECH