Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0345 ATGGCTCGTTGTTTTTCTACTTCATCCTTTGCCATTTTTGCCTTCTCTTTATTCCTGGTTCTGGCAGGGACCTCTTCAGCTCATTTACTCCGTCCGAACTTCTATCATAAAAATTGCCCAAATCTTTTCCCCATTGCGAGATCTGTTGTTAAATCAGTTGTGACCAAACAGCCTGTTCTTGGAGCTGGTTTGCTTCGTCTCTTCTTTCATGACTGTTTTGTCAATGGTTGTGATGCGTCAATATTACTGGATGACACTTCAACGTTCACGGGAGAGAAGACTGCAGGTCCCAACAATGGATCTATTAGAGGTTATGAAGTGATTGATGAAATCAAGTCTAAGTTGGAAGCAGCTTGTCCTGGCGTTGTCTCTTGTGCTGATATTGTATACATTGCTGCTCGTGACTCTGTTGTTCTTCTTGGAGGGCCGAATTGGGATGTTAAATTGGGAAGAAGGGATTCAAAGACAGCAAGCTTTAGTCTTGCACAGAGTGGTGTACTTCCACCTCCATCTTTTAATTTAAGCAACCTTATCTCTTCGTTTAAAGCTCAAGGCCTCTCAGCAAGAGACATGGTTGCCTTATCTGGAGGCCACACCATAGGGCAAGCAAGATGCTCTAGTTTTACATCTCGCGTATATAATGAGACCAACATTGACCCTTCTTTTGCCAAGGCCAAGCAGCAACTTTGTCCATTGACTAATACTCCCACTAATTTTATTGGGAACTTGGACATTACAAGTCCTAACTATTTTGACAATGGCTACTTCAAGAACCTCCTCAACAAGAAGGGACTTCTCCACTCTGATCAAGTTCTCTTCAATGGTGGCTCCACCGATTCGCTTGTTCAAACATATGCTCAAGACATGAACGCCTTTAATAGAGACTTTGTGAACGGCATGATCAGGATGGGAGACATCAAACCCTTGGTTTATCCCAATGGAGAGATCAGGAAGAACTGTAGGAGGGCGAACTAG 975 0.4328 MARCFSTSSFAIFAFSLFLVLAGTSSAHLLRPNFYHKNCPNLFPIARSVVKSVVTKQPVLGAGLLRLFFHDCFVNGCDASILLDDTSTFTGEKTAGPNNGSIRGYEVIDEIKSKLEAACPGVVSCADIVYIAARDSVVLLGGPNWDVKLGRRDSKTASFSLAQSGVLPPPSFNLSNLISSFKAQGLSARDMVALSGGHTIGQARCSSFTSRVYNETNIDPSFAKAKQQLCPLTNTPTNFIGNLDITSPNYFDNGYFKNLLNKKGLLHSDQVLFNGGSTDSLVQTYAQDMNAFNRDFVNGMIRMGDIKPLVYPNGEIRKNCRRAN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0345 324 ProSiteProfiles Plant heme peroxidase family profile. 29 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PANTHER PEROXIDASE 72-RELATED 28 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 FunFam Peroxidase 33 174 - -
Mibi08g0345 324 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Mibi08g0345 324 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 FunFam Peroxidase 168 303 - -
Mibi08g0345 324 Pfam Peroxidase 47 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 Gene3D - 33 321 - -
Mibi08g0345 324 SUPERFAMILY Heme-dependent peroxidases 30 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Mibi08g0345 324 CDD secretory_peroxidase 30 322 IPR033905 GO:0004601|GO:0042744
Mibi08g0345 324 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g0345 324 Gene3D Peroxidase, domain 2 168 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0345 Mibi-ChrMibi08 5133631 5138597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0345 4 324 Peroxidase AT5G58400 61.300 1.26e-142 404