Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0337 ATGCCTTCTTCTTCTTCTATGGCTTCTCTGTTTTTTCACTTCCTTCTTGTTTTCCTTCCTTTCACTGCCTCTTCTTCTTCCTCTGTTTCATCACTTCCTCTCTTGTCTCTCAAAAATCAAGCTTCAATCTTGGTGTCTCTCAGACAAGGTTTTCAACCTCAAAATTCTTCCCTCGAAACATGGAATGTGTCTAATTATCTGTCTCTTTGTTCTTGGGATGGCATCAAATGTGACAGTAGCAACAGGTCTGTGGTTTCCTTTGACATATCAAATTACAACTTTTCTGGGTTTCTTTCCCCTGTCATCTCCCAGCTCCGGGGACTTGTGTCTGTCTCAGTCGCCGGAAACAGCTTTTCCGGCGAGCTTCCTCCTGAGATTCTCCGGCTTCCTGGCCTGAGATTCCTCAACATATCCAACAACATGTTCACTGGTAATCATACTTGGGACTTCTCAGACATGAGTGAGCTTGAAGTTCTTGATGCTTATGACAACAACTTTGATGGTGAACTACCTCTTGGTGTCACTGATCTTCCCAAGCTGAAGCACTTGAATTTTGGCGGGAATTACTTCTCTGGGAGAATCCCAGAAGAGTATGGGAAAATGGTGGGATTGAATTTTCTCTCTCTTGCTGGGAATGATCTAAGTGGGTTTATACCCAGTGGGCTTGGGAATCTCACAAATTTGACCCATTTATTTTTGGGATATTTCAACAAGTTTGATGGTGGAATCCCAAGTGAGTTTGGGAGTTTGATCAATTTGGTTCACCTTGACCTTGCAAATTGTAGCTTGAATGGTACAATTCCTTCAGAATTAGGCAAGCTCTCAAGTTTGGATACTCTTTTCTTGCAAACCAATCAGCTTAGTGGTTCAATCCCACCTCAGATAGGGAACTTGAGTAACTTGAGATCTCTTGATCTTTCCAACAATGAGCTAATTGGGGAAATCCCATTTGAGCTCTCAAACCTCCATGAGCTCACACTCATGAATTTGTTCATCAACAGATTGCATGGTGAGATTCCTCAGTTCATATCTGAGCTCCCAAAGCTTGAAACTTTACATCTTTGGAAGAACAACTTCACTGGTTCTATCCCTCCTGGGCTTGGCCAGAATGGGAAATTAATTGAGCTTGATCTTTCATCAAATAAGCTTACTGGGTTAGTCCCAAAATCTCTCTGCCTTGGTAAGAAGCTCAAGATATTAATCTTGCTCAATAATTTTCTCTTTGGATCTTTGCCTGATGACCTTGGAGAATGCTACACACTTCAAAGAGTTCGCTTGGGTCAGAACTATTTGACAGGAAAAATACCAAATGGTTTTCTTTATCTGCCTGAACTCTTACTTCTTGAGCTGCAGAACAACTACCTCACTGGTGTTCTTCCTCAAGATTCAGCAAATTCAACATCAAAACTAGAGCAGTTGAATCTATCAAACAACCGTCTCTCAGGGTCTCTCCCGGGATCAATTGGGAATTTCCCAAATTTGCAGAATCTTCTCCTCAGTGAAAACAGATTCTCTGGAGGAATCCCACCAGATATAGGGAGGTTGAAGAATCTGCTAAAGTTGGATACGAGCAAGAACAACATATCAGGTAGTATTCCTTTAGAGATAGGGAACTGTACTTTGCTCACATACTTAGACTTGAGCCAGAACCAACTTTCAGGTCCCATCCCAGTTCAAATCTCCCAAATTCACATATTGAACTATCTTAATGTCTCAAGGAACAACCTTAACCAGAGCCTCCCAAAAGAACTAGGGACCATGAAAGGGTTAACCTCAGCAGATTTCTCCCACAACAACTTCTCTGGTTCAATTCCTGACGTTGGGTTGTTCACAGTCTTGAATTCATCCTTCTTTCAGGGAAACCCAAATCTATGTGGGTATGATCTAAACCCATGTGGTACTCATTCATCAAACTCGCTTTCAGATTCTCATGAGGCTGACAACACAAAATCCGGAGTTCCTGGGAAGTACAAGCTTCTTTTTGCACTTTCACTGCTGGGATGTTCTTTAATTTTTGCAGCCTTGGCCATCATCAAAAGCAGAAAGAAGGCAAGGAGGAATTCAAATTCATGGAAGCTCACAGCATTTCAGAAGCTAGAATATGGGAGTCAAGACATATTGGAATGCATAAAGGAGAGCAATGTGATAGGAAGAGGAGGAGCCGGGATTGTGTACAGAGGCACCATGCCAAATGGTGAGGATCTAGCAGTGAAAAAACTCTTAGGATTCAACAAAGGCTCTTCTCATCATGACAATGGCTTATCTGCAGAAATAAGAACATTGGGCAGAATAAGGCATAGGTACATTGTGAGATTATTAGCTTTTGTCACAAACAGAGAGACAAATTTGCTTGTGTATGAGTACATGCCAAATGGAAGTTTGGGCGAAGTGCTTCACGGGAAGAGAGGCGAGTTTTTGAAGTGGGAGACAAGGCTTAAGATAGCAATTGAAGCAGCAAAAGGGCTTTGTTATCTGCACCATGATTGTTCACCATTGATAATACATAGAGATGTGAAGTCCAATAACATATTGCTGAATTCTGAGTTTGAGGCTCATGTGGCTGACTTTGGACTTGCCAAGTTCTTACAAGACACTGGTACATCAGAATGCATGTCCTCCATTGCTGGCTCTTATGGCTATATTGCTCCAGAGTATGCATACACATTAAAAGTTGACGAAAAGAGTGATGTTTATAGTTTTGGAGTGGTACTGTTAGAACTTTTGACGGGTAGACGGCCAGTGGGAGATTTTGGAGAAGAAGGGATAGACATTGTTCAGTGGACAAAGATGCAAACAAACTGGAGCAAAGACAAGGTGGTGAGGGTCCTTGATGAGAGGCTGGGCAATCGTATTCCTATAGATGAAGCAAAACAAGTGTTCTTTGTGGCCATGCTATGTGTTCAAGAACACAGTGTGGAGAGACCCACTATGAGAGAAGTGGTTGAAATGCTTGTACAAGCAAAGCAGCCCAATACATTTTAA 2982 0.4199 MPSSSSMASLFFHFLLVFLPFTASSSSSVSSLPLLSLKNQASILVSLRQGFQPQNSSLETWNVSNYLSLCSWDGIKCDSSNRSVVSFDISNYNFSGFLSPVISQLRGLVSVSVAGNSFSGELPPEILRLPGLRFLNISNNMFTGNHTWDFSDMSELEVLDAYDNNFDGELPLGVTDLPKLKHLNFGGNYFSGRIPEEYGKMVGLNFLSLAGNDLSGFIPSGLGNLTNLTHLFLGYFNKFDGGIPSEFGSLINLVHLDLANCSLNGTIPSELGKLSSLDTLFLQTNQLSGSIPPQIGNLSNLRSLDLSNNELIGEIPFELSNLHELTLMNLFINRLHGEIPQFISELPKLETLHLWKNNFTGSIPPGLGQNGKLIELDLSSNKLTGLVPKSLCLGKKLKILILLNNFLFGSLPDDLGECYTLQRVRLGQNYLTGKIPNGFLYLPELLLLELQNNYLTGVLPQDSANSTSKLEQLNLSNNRLSGSLPGSIGNFPNLQNLLLSENRFSGGIPPDIGRLKNLLKLDTSKNNISGSIPLEIGNCTLLTYLDLSQNQLSGPIPVQISQIHILNYLNVSRNNLNQSLPKELGTMKGLTSADFSHNNFSGSIPDVGLFTVLNSSFFQGNPNLCGYDLNPCGTHSSNSLSDSHEADNTKSGVPGKYKLLFALSLLGCSLIFAALAIIKSRKKARRNSNSWKLTAFQKLEYGSQDILECIKESNVIGRGGAGIVYRGTMPNGEDLAVKKLLGFNKGSSHHDNGLSAEIRTLGRIRHRYIVRLLAFVTNRETNLLVYEYMPNGSLGEVLHGKRGEFLKWETRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGIDIVQWTKMQTNWSKDKVVRVLDERLGNRIPIDEAKQVFFVAMLCVQEHSVERPTMREVVEMLVQAKQPNTF 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0337 993 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 679 788 - -
Mibi08g0337 993 ProSiteProfiles Leucine-rich repeat profile. 372 393 IPR001611 GO:0005515
Mibi08g0337 993 PRINTS Leucine-rich repeat signature 467 480 - -
Mibi08g0337 993 PRINTS Leucine-rich repeat signature 373 386 - -
Mibi08g0337 993 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Mibi08g0337 993 Gene3D Transferase(Phosphotransferase) domain 1 789 992 - -
Mibi08g0337 993 Gene3D Ribonuclease Inhibitor 348 636 IPR032675 -
Mibi08g0337 993 ProSiteProfiles Leucine-rich repeat profile. 469 491 IPR001611 GO:0005515
Mibi08g0337 993 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 350 636 - -
Mibi08g0337 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 282 986 - -
Mibi08g0337 993 Gene3D Ribonuclease Inhibitor 149 240 IPR032675 -
Mibi08g0337 993 Gene3D Ribonuclease Inhibitor 241 342 IPR032675 -
Mibi08g0337 993 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 238 343 - -
Mibi08g0337 993 SMART serkin_6 710 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0337 993 SUPERFAMILY Protein kinase-like (PK-like) 705 985 IPR011009 -
Mibi08g0337 993 FunFam Leucine-rich repeat receptor-like protein kinase 37 196 - -
Mibi08g0337 993 SMART LRR_typ_2 467 490 IPR003591 -
Mibi08g0337 993 SMART LRR_typ_2 250 274 IPR003591 -
Mibi08g0337 993 SMART LRR_typ_2 346 370 IPR003591 -
Mibi08g0337 993 SMART LRR_typ_2 442 465 IPR003591 -
Mibi08g0337 993 SMART LRR_typ_2 129 152 IPR003591 -
Mibi08g0337 993 SMART LRR_typ_2 371 393 IPR003591 -
Mibi08g0337 993 SMART LRR_typ_2 491 515 IPR003591 -
Mibi08g0337 993 SMART LRR_typ_2 201 225 IPR003591 -
Mibi08g0337 993 SMART LRR_typ_2 563 587 IPR003591 -
Mibi08g0337 993 SMART LRR_typ_2 298 322 IPR003591 -
Mibi08g0337 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Mibi08g0337 993 Gene3D Ribonuclease Inhibitor 39 148 IPR032675 -
Mibi08g0337 993 Pfam Leucine Rich Repeat 300 322 IPR001611 GO:0005515
Mibi08g0337 993 Pfam Leucine Rich Repeat 252 274 IPR001611 GO:0005515
Mibi08g0337 993 Pfam Leucine Rich Repeat 372 392 IPR001611 GO:0005515
Mibi08g0337 993 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 789 993 - -
Mibi08g0337 993 Gene3D Phosphorylase Kinase; domain 1 676 788 - -
Mibi08g0337 993 SUPERFAMILY L domain-like 314 649 - -
Mibi08g0337 993 ProSiteProfiles Leucine-rich repeat profile. 300 323 IPR001611 GO:0005515
Mibi08g0337 993 SUPERFAMILY RNI-like 87 408 - -
Mibi08g0337 993 Pfam Protein tyrosine and serine/threonine kinase 712 984 IPR001245 GO:0004672|GO:0006468
Mibi08g0337 993 ProSiteProfiles Protein kinase domain profile. 710 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0337 993 Pfam Leucine rich repeat 448 504 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0337 Mibi-ChrMibi08 5034774 5039381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0337 25 986 Receptor kinase-like Gene Family AT5G65700 57.365 0.0 1078
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi08g0337 PK_Tyr_Ser-Thr 1.3e-44 CL0016