Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0336 ATGGTCGGCGGCAACAACGTAAACTCAGTGTTCTATGCTGAATCTTACCATCCCATTCAATCTGGCAGCATCGACGGCACTGATATTCTTCCTCACGATAATGCTGTTTATCGAGCTCTTCTCTGTTCTTCAGCTGGCCTCTATGACCCATTTGGCGATCCCAAGGTTGAAGGCGACCCATATTGTACTGTCTTCGTTGGTCGTCTCTCTCGTCTCACCACTGAAGAAACCCTTCACAAAGTTATGGGCAAGTATGGTCGGGTGAAGAACTTGCGATTGGTCAGGGACATTGTGACTGGAGCCTCCCGTGGTTATGCTTTTGTTGAGTATCAAACTGAAAGTGAGATGCTGCGTGCTTATGAGGATGCTCATCATTCTTTTATTGATGATTGTGAAATCCTAGTTGATTATAACAGACAGCAATTGATGCCTGGGTGGATCCCTAGAAGGTTAGGTGGTGGTCTTGGCGGTAAGAAGGAATCTGGACAACTTCGTTTTGGTGGAAGGGAAAGGCCATTTCGAGCTCCTCTGAGGCCAATACCATACAAGGATTTGGAGAGGCTAGGCATTCCACCTCCTCCGGAAGGAAGATACATGTCACGCTTTCAGATCCCATCACCTCCTAGAAGAGAAAGGAGCAATCGAGATAGAGAAGGCTCTAGCAGAAGGAGGAGTTCAAATGACAGGATGGAAGGTGCCGACAGGCACCGAGACGACTATACGCATCGAAGAAGGAACTCCATGGAGAGAAGAGAGGATAGAGATGGGCATTACTACAGGAGTAGGAGTTATACTGATGAGAAGGAGCGGCATTCCAGGCGGGAACACTCTCGTAAAAGGAAAGATAGAGATGAACACTCTCAGAGGAGGCAGAAACATGACCATTATTCCCATCGTGACGATGAGTAA 909 0.4752 MVGGNNVNSVFYAESYHPIQSGSIDGTDILPHDNAVYRALLCSSAGLYDPFGDPKVEGDPYCTVFVGRLSRLTTEETLHKVMGKYGRVKNLRLVRDIVTGASRGYAFVEYQTESEMLRAYEDAHHSFIDDCEILVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPYKDLERLGIPPPPEGRYMSRFQIPSPPRRERSNRDREGSSRRRSSNDRMEGADRHRDDYTHRRRNSMERREDRDGHYYRSRSYTDEKERHSRREHSRKRKDRDEHSQRRQKHDHYSHRDDE 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0336 302 FunFam Small nuclear ribonucleoprotein U11/U12 subunit 35 49 170 - -
Mibi08g0336 302 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 62 140 IPR000504 GO:0003723
Mibi08g0336 302 SUPERFAMILY RNA-binding domain, RBD 49 168 IPR035979 GO:0003676
Mibi08g0336 302 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 133 IPR000504 GO:0003723
Mibi08g0336 302 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 11 230 - -
Mibi08g0336 302 CDD RRM_snRNP35 59 148 IPR034146 -
Mibi08g0336 302 SMART rrm1_1 63 136 IPR000504 GO:0003723
Mibi08g0336 302 Gene3D - 49 169 IPR012677 -
Mibi08g0336 302 MobiDBLite consensus disorder prediction 151 302 - -
Mibi08g0336 302 MobiDBLite consensus disorder prediction 208 302 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0336 53 135 Eukaryotic Initiation Factors Gene Family AT1G49760 31.325 2.19e-06 47.0