Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0327 ATGTCAAAGCTGTATATCATACCCAAGTTTCTGTTGGCATGCGATTTAGGATGTTATTCGAGACAGAAGAATGAAGTGTCCGTAGGTAGGTACATGGGTACTATAACAGGAATTAGTGATTTAGATCCTGTTCACTGGCCAAATTCACACTGGCTTTCAGTGAAGGTTGGCTGGGACGAGTCCACTGCAGGGGACAGGCAGCCTAGAGTTTCCTTGTGGGAGATTGAACCATTGACAACATTCCCTATGTATCCATCCCCATTCCCTTTGAGGCTAAAACGCCCTTGGCCCTCGGGACTACCTTCTTTTGGTAGAATGCAATCCCTGAACTTCCAGGGACTGGGGGTTGCACCATGGATGCAACCAAGACTTGATGCTTCTATGTCAGGACTTCAGCCAGAAATATATCAAGCAATGGCTGCTGCTGCACTTCAGGAAATGAGGGGAATGGGTCCATCTAAGCCTTCTTCTGAATCTCTGCTGCAGTTTCAGCAGTCTTCAAATGTTTCTGCTGCTCCTTCTGGTATCCAGAGACAAGTGTTACAGCAGTCTCAGTCCCAAAATGTCCTACACAATTTTCAAGAAAACCAGATTCCTTCTCACTCTTCACTTCTGCAACGACAGATGCAGCGTTACCATCCTTATAATGATCAGAGGCAGCAGCAGCAGCAACCTAACAGTTTACCTGTTCAGCAGCATATCTCAAATGTTGTCTCTCCTTTGTCTAATTTTGCATCACCTACCCAGTTTCTCTCTCCATCCATGCCGACCATTGTTTCAAATTGCCAACAGCAGAGTTTTCCTGAATCCGTCAGGAACCAAATTCCCAGCTCTGATGTTTCTGCTATCCAGAGTCTACTAGGATCATTTCCCCAGGATGGAGTATCCCAGTTACTTAACATGAATGGACCCAAATCTCTAGTTTCTCCTGCTTCCTTACTACCCAAGCAAATAGCTGTTGAACCTCAGCTTCAAACTGCTGTTGCTCAGTGTGTACTACCGGAGGTGGAAAACTTGGGAACAACACACTCAAATGTATCTGAACTTCCCATTTTGCCTCCATTTCCTGGAAGAGAATATTCTGCATATCAAGGTGCTGCTGATCCTCAGACCAATCTTGTGTTTGGGGTTAATATTGGTCCTACTCTTATGTTACAAAATAGCATGTCAAGCATGAGAAATGTTAGCAATGAAAATGATACATTATTGATGCCTTTTTCAGCTTCAAACTTCGCTGGTGCTACAGGGACTGATTATCCTCCAAGTTCAGACATGACAACATCAAGTTGTGTAGATGAATCTGGCTTTTTACAGTCTTCTGAAAATGTGGAGCAAGCAAATACGTCAACTGGAACCTTTGTCAAGGTTCACAAGTCGAGGTGCTTTGGGAGGTCACTGGACATCTCTAAGTTTAGCAGCTATGATGAACTTCGTAGTGAGCTTGCCCGCATGTTTGGGCTTGAAGGCCAACTAGAGAACCCTCAGAGATCAGGCTGGCAACTTGTATTCGTTGACCGGGAGAATGATGTTCTTCTCCTTGGTGATGATCCGTGGCAGGAGTTTGTGAACAATGTGTGGTACATCAAGATTCTGTCTCCAGTCGAAGTACAACAAATGGGCAGCGATAGTCTTGGTCCCACAGCTTGTGCATTGGGCCACAAGCTTTCTCCCACTAGCAATGCTTGTGACAACTATGCTAGTCGACAAGAGTTGAGAAATTCTAGCAGTGGCATTGCGTCGATGGGGTCTTTAGAATATTAG 1761 0.4492 MSKLYIIPKFLLACDLGCYSRQKNEVSVGRYMGTITGISDLDPVHWPNSHWLSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPSGLPSFGRMQSLNFQGLGVAPWMQPRLDASMSGLQPEIYQAMAAAALQEMRGMGPSKPSSESLLQFQQSSNVSAAPSGIQRQVLQQSQSQNVLHNFQENQIPSHSSLLQRQMQRYHPYNDQRQQQQQPNSLPVQQHISNVVSPLSNFASPTQFLSPSMPTIVSNCQQQSFPESVRNQIPSSDVSAIQSLLGSFPQDGVSQLLNMNGPKSLVSPASLLPKQIAVEPQLQTAVAQCVLPEVENLGTTHSNVSELPILPPFPGREYSAYQGAADPQTNLVFGVNIGPTLMLQNSMSSMRNVSNENDTLLMPFSASNFAGATGTDYPPSSDMTTSSCVDESGFLQSSENVEQANTSTGTFVKVHKSRCFGRSLDISKFSSYDELRSELARMFGLEGQLENPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPVEVQQMGSDSLGPTACALGHKLSPTSNACDNYASRQELRNSSSGIASMGSLEY 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0327 586 ProSiteProfiles PB1 domain profile. 451 535 IPR000270 GO:0005515
Mibi08g0327 586 Gene3D - 19 82 - -
Mibi08g0327 586 MobiDBLite consensus disorder prediction 147 166 - -
Mibi08g0327 586 SUPERFAMILY CAD & PB1 domains 442 525 - -
Mibi08g0327 586 FunFam Auxin response factor 20 82 - -
Mibi08g0327 586 Gene3D - 447 540 - -
Mibi08g0327 586 FunFam Auxin response factor 446 540 - -
Mibi08g0327 586 Pfam AUX/IAA family 440 536 IPR033389 -
Mibi08g0327 586 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 24 540 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0327 Mibi-ChrMibi08 4905666 4918599 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0327 241 582 B3 DNA Binding Superfamily AT1G30330 50.000 1.02e-84 281