Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0289 ATGGAAGTGATGGGTAAGCTTAAAGTTAGCTCATCAGATGATAAGAGAGTAGAAGAAGGAGAAGAAGAAGTGATGGCTCCTGGGTTTAGATTCCATCCCACAGATGAAGAACTTGTAGGGTTTTACTTGCAGAGAAAAGTGAAGAAGAAGCCTCTTCGAATCGAACTCATCAAACAGATTGACATCTATAGATACCATCCTTGGGATCTTCCAAGGAGTAATAATGGGGTGGAAGGGGAGAGAGAAGGATTTTTTTTTTGCAAGAGAGGGAGGAAGTACAGGAACAGCAAGAGGCCTAACAGAGTGACAGTGAGTGGATCTGGGTTTTGGAAAGCAACAGGCATTGATAAGCCTATATATGGAGAAGAAGGAGCTCAAAACGGCGTCGTAATTGGCCTCAAGAAGTCATTAGTGTATTATGAAGGAAATGCTGGTAAAGCCTCCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCTCCTCCCAAATCCAACACCAATAATACTCTTGATCATCATCTTCTTCTTCATGAAGCTGAAGTTTGGACACTCTGCAAAATATTCAAACGAACCTCATCTCAGAAAAAGCGCACACATGCAGCTGCAATCAAACCCAGCCTAGCTCATTCAAATCCTGAATCAGGAAACTTAAGATCTGACATCAATAGCAACTCATACTTCACAATCAAAAACTCAATGGTCATTCAGCAAAATGATGAAAGGAGGCAGATTTGGAAGAACATTGAAGAGGTTGAACATGAAAGAAACAACTTGTATCTGGACCAGTTAGCTCAAGCTTCACCATCACTAGTATCTTACCCTAGCTTGTGGGACCCTGTTCCTGGTGTGATGGAAGAGAATACATTTGCTAATGGAAACTGGGATGAACTTCTACCTATGGTTACATTAGCTATGGATGATCCATCTAAGTTCATTATGAGTGCACATAGCTATATTTAA 960 0.4094 MEVMGKLKVSSSDDKRVEEGEEEVMAPGFRFHPTDEELVGFYLQRKVKKKPLRIELIKQIDIYRYHPWDLPRSNNGVEGEREGFFFCKRGRKYRNSKRPNRVTVSGSGFWKATGIDKPIYGEEGAQNGVVIGLKKSLVYYEGNAGKASKTDWMMHEFRLPPPKSNTNNTLDHHLLLHEAEVWTLCKIFKRTSSQKKRTHAAAIKPSLAHSNPESGNLRSDINSNSYFTIKNSMVIQQNDERRQIWKNIEEVEHERNNLYLDQLAQASPSLVSYPSLWDPVPGVMEENTFANGNWDELLPMVTLAMDDPSKFIMSAHSYI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0289 319 ProSiteProfiles NAC domain profile. 25 190 IPR003441 GO:0003677|GO:0006355
Mibi08g0289 319 SUPERFAMILY NAC domain 23 189 IPR036093 GO:0003677|GO:0006355
Mibi08g0289 319 Gene3D NAC domain 34 195 IPR036093 GO:0003677|GO:0006355
Mibi08g0289 319 Pfam No apical meristem (NAM) protein 27 159 IPR003441 GO:0003677|GO:0006355
Mibi08g0289 319 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0289 Mibi-ChrMibi08 4336827 4340140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0289 18 226 NAC Transcription Factor Family AT1G26870 50.467 3.29e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi08g0289 NAM 3.1e-33 No_clan