Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0279 ATGTTTCCTATGGCATTCCCTCTCCTAGCTTGCTCTGCAACTTGGAGATTGCAACTCTCTGCCTGTCGTATCTCTGAGGCTCTTCCTAATCTCCCCAACAAAGCCTTTCATTTTTACTGGGCAATGAATGCCAAATCCTGCTTAGAAAGGTGGAAGAACTACCTCAGGCCTGGCATCAAGAAGGGGTCTCTTACTGAAGAAGAGAAATCTCTTGTCATCTGCCTTCAACAGATTTATGGCAACAAGTGGAAGAAAATTGCTGCAGAAGTCCCAGGCTGCACTGCTTGA 288 0.4618 MFPMAFPLLACSATWRLQLSACRISEALPNLPNKAFHFYWAMNAKSCLERWKNYLRPGIKKGSLTEEEKSLVICLQQIYGNKWKKIAAEVPGCTA 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0279 95 Pfam Myb-like DNA-binding domain 61 92 IPR001005 -
Mibi08g0279 95 SUPERFAMILY Homeodomain-like 43 94 IPR009057 -
Mibi08g0279 95 Gene3D - 64 95 - -
Mibi08g0279 95 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 43 95 - -
Mibi08g0279 95 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 95 IPR017930 -
Mibi08g0279 95 CDD SANT 65 92 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0279 Mibi-ChrMibi08 4153940 4155653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0279 43 95 MYB Transcription Factor Family AT2G37630 83.019 8.27e-25 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi08g0279 Myb_DNA-binding 8.8e-06 CL0123