Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0274 ATGGGTTCGTTCAAGCAGTTTCACCAATACCAGGTGGTGGGAAGGGCTCTTCCCACAGAGACCGATGAGCACCCCAAGATCTACCGTATGAAGCTTTGGGCCACCAATGAGGTCCGTGCCAAATCCAAGTTCTGGTATTTCCTGAGAAAGCTGAAGAAGGTGAAGAAAAGCAATGGGCAAGTGCTAGCCATTAACGAGATTTTTGAGAAAAACCCTACCAAGATTAACAACTATGGAATTTGGCTGCGATATCAAAGTAGGACTGGTTACCATAACATGTACAAGGAATATCGAGATACCACTCTCAATGGCGCTGTTGAACAAATGTACACTGAAATGGCTTCACGTCATCGGGTGAGGTTTCCGTGCATCCAGATCATCAAGACAGCAACCATCCCTGCAAAGCTGTGCAAAAGGGAGAGTTCCAAGCAGTTCCACAATTCTAAAATCAAGTTCCCATTGGTGTTCAAGAAGGTTAGGCCGCCAAGCAGGAAGCTGAAGACAACTTTCAAGGCATCAAGGCCCAACTTGTTTATGTGA 540 0.4593 MGSFKQFHQYQVVGRALPTETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKINNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVFKKVRPPSRKLKTTFKASRPNLFM 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0274 179 Hamap 50S ribosomal protein L18Ae [rpl18a]. 7 70 IPR028877 -
Mibi08g0274 179 PANTHER 60S RIBOSOMAL PROTEIN L18A 6 178 IPR028877 -
Mibi08g0274 179 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 8 129 IPR023573 GO:0003735|GO:0005840|GO:0006412
Mibi08g0274 179 Gene3D - 72 144 - -
Mibi08g0274 179 SUPERFAMILY RplX-like 72 147 - -
Mibi08g0274 179 FunFam 60S ribosomal protein L18a 73 148 - -
Mibi08g0274 179 PIRSF Ribosomal_L18a 1 179 IPR021138 GO:0003735|GO:0005840|GO:0006412
Mibi08g0274 179 Gene3D - 2 71 - -
Mibi08g0274 179 FunFam 60S ribosomal protein L18a 3 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0274 Mibi-ChrMibi08 4077700 4079337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0274 1 179 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 90.503 6.79e-123 343