Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0270 ATGATATACTCATTGAGGACGAATAGCTGGAGCAATGTGTTTGATAGTTTGCTATCTGGTATATGTATCTTGGGTAAGGATTGGAGTAATACGTATGTTGGTGGTGCCTGCCACTGGTTTGCACACGATAATGATGTGCGTCAGTACATTCAGACATTCGATTTTAGCACCGAAACGTTTAGAAAGATCATATTGTCAAAGGTAAAGCGACAGCCCATGGATCATAATGAAAATGCGACTATTTTCAAGGGATGTCTTCCTGTGATTGACTGGTTAAGAGATGCTAAAAATGAATTGTCCTGTGAACTGTGGGTTATAATAGATCAAGGAAATGAAGATTCTTGGACTATGGAATCTGTTATTGGACCAATAAGACGAGCTAAGCAGTTATGTTTATCTACGGTTGAATGGAAGCTCTATCGGCTTAGTTTGTTAATCAAACTTGAAATTTACATATGGTTTCACAATGGGAGAGAAGGAGATTCTTACACCAGAGGCACTAGTCGAACAAATCAAAGCAGACAGAAGCTTCAGTTGTACTGCCTGATATGTCAGAAGCAATATCGAGATGAGAATGTGTTCAAGTCTCATTTCATGAGTGAAAGACACATGCAACAAAAGCAAATCCATGAACTAAACCCAAATTGGAGGACTGATTGCTACTCTGAAATGTTTGAAAAAGACTATCTTGAGATCTTGAGGGACCTACACCAATCCAATCGTGTTTCGGCTATGTTAGTGTACAATCAATACCGTATGGATCTGAATCACATTCCTGTGAGTGCTACTCGGTGGCTTACGCTAGCTGAGCTTGTCAAGTATTTGGGCCACCAGACTGGAAAGTGCCGGGTTGAAGAAACGCCTGACGGCTGGTATATCACCTACGTTGGAAGAGTCAGAGGCAGATGA 909 0.4092 MIYSLRTNSWSNVFDSLLSGICILGKDWSNTYVGGACHWFAHDNDVRQYIQTFDFSTETFRKIILSKVKRQPMDHNENATIFKGCLPVIDWLRDAKNELSCELWVIIDQGNEDSWTMESVIGPIRRAKQLCLSTVEWKLYRLSLLIKLEIYIWFHNGREGDSYTRGTSRTNQSRQKLQLYCLICQKQYRDENVFKSHFMSERHMQQKQIHELNPNWRTDCYSEMFEKDYLEILRDLHQSNRVSAMLVYNQYRMDLNHIPVSATRWLTLAELVKYLGHQTGKCRVEETPDGWYITYVGRVRGR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0270 302 Pfam Zinc-finger double-stranded RNA-binding 178 203 IPR022755 -
Mibi08g0270 302 Pfam Domain of Kin17 curved DNA-binding protein 212 298 IPR019447 -
Mibi08g0270 302 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 174 298 IPR037321 -
Mibi08g0270 302 Gene3D - 213 300 IPR038254 -
Mibi08g0270 302 ProSitePatterns Zinc finger C2H2 type domain signature. 181 203 IPR013087 -
Mibi08g0270 302 TIGRFAM F_box_assoc_1: F-box protein interaction domain 2 120 IPR017451 -
Mibi08g0270 302 SMART Kin17_mid_2 207 300 IPR019447 -
Mibi08g0270 302 SUPERFAMILY beta-beta-alpha zinc fingers 178 209 IPR036236 -
Mibi08g0270 302 Pfam F-box associated 33 118 IPR006527 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0270 Mibi-ChrMibi08 4014175 4019832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0270 175 298 C2H2 Transcription Factor Family AT1G55460 51.613 1.05e-38 139