Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0263 ATGTCATCAAATAGCTCTTTAAAAGCGGAATTGTCAAAGAAGGTTTTGGGTGTGAAATTATGGATTTTAATTGGGATTTGCGTGGGCGCATTTATAGTACTGATTCTTTGTATACTATCTATTTGGGTAATGTTTCGGAGAAAGTCTAGAAGATCTCTGGACAGTTATTCTTTATCCCAAATACCAAATATCTCTAAAGATATTAAGGTGGATAAAGTTGGGGTGCAGAGTTCTCATGATCACCCGGAAAGCGTATTTATTCATGTTAATGACAAAGCAGCTGATAAGAATTCAGATAAGATGCTTGCCCACTTAGGTATGAGCAAATCCAGTGATCATGACAATATCAGTCAGTGCAGCTCTATTTATCATCACGAGAGAGGATTTAGTTCCCTGTCAGGAGAAGAAGGAAGCTCTGGGACTGTAAAGAAGCAATCTACATTGTCTTATGGAGGGCTTGTGACTGCATCTCCTTTAGTTGGCCTGCCTGAAATTTCTCATCTTGGATGGGGCCATTGGTTTACACTTAGGGATCTGGAACTAGCGACAAATCGTTTCTCACCTGAAAATGTGCTAGGTGAGGGCGGATATGGTGTTGTTTACAAGGGCAGACTGATCAATGGAACTGAGGTGGCAGTGAAGAAAATTCTTAATAACTTGGGACAAGCAGAGAAAGAATTCCGGGTAGAAGTAGAAGCTATAGGACATGTACGACATAAAAATCTTGTACGCCTGCTAGGATATTGCATTGAAGGAGTTCACAGGCTTTTGGTGTATGAATATGTAAATAACGGGAACTTAGAACAATGGTTACATGGGGCTTTGCGCCAACATGGAATTCTTACATGGGAGGCCCGAATGAAAGTTGTACTAGGCACTGCCAAAGCGCTTGCTTACTTGCATGAAGCTATTGAACCGAAAGTTGTTCACCGCGATATAAAGTCGAGCAATATATTAATTGATGATGAGTTTAATGCTAAGGTTTCTGACTTTGGATTGGCCAAACTTTTGGATTCAGGAGAAAGCCACATAACTACTAGAGTAATGGGAACATTTGGTTATGTGGCACCAGAGTATGCTAATACTGGTTTATTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTGCTCTTGGAAGCGGTCACTGGAAGGGATCCTGTAGATTATGCGCGACCTGCTAACGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGACAAAGAGAGCCGATGAAGTTGTAGATCTAAGCCTTGAAGTTAAACCATCAACACGAGCTCTAAAGCGTGCTCTTCTGGTCGCACTTAGGTGTGTTGATCCTGATGCAGAAAAGAGACCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATATCCCTTCCGAGAGGATCGAAGGAATCGAAAGAGCCGTAGTACCAGCATGGAAATTGATTCCATGAAGGATATTTCTGGTTCATCTGAAGTAGAAAAGAAGCCGGGCGATGCTGAAAACCAAGCACTAGATACAACTGAGGGGTAG 1530 0.419 MSSNSSLKAELSKKVLGVKLWILIGICVGAFIVLILCILSIWVMFRRKSRRSLDSYSLSQIPNISKDIKVDKVGVQSSHDHPESVFIHVNDKAADKNSDKMLAHLGMSKSSDHDNISQCSSIYHHERGFSSLSGEEGSSGTVKKQSTLSYGGLVTASPLVGLPEISHLGWGHWFTLRDLELATNRFSPENVLGEGGYGVVYKGRLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGALRQHGILTWEARMKVVLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTKRADEVVDLSLEVKPSTRALKRALLVALRCVDPDAEKRPKMSQVVRMLEADEYPFREDRRNRKSRSTSMEIDSMKDISGSSEVEKKPGDAENQALDTTEG 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0263 509 CDD STKc_IRAK 192 458 - -
Mibi08g0263 509 MobiDBLite consensus disorder prediction 464 479 - -
Mibi08g0263 509 MobiDBLite consensus disorder prediction 464 509 - -
Mibi08g0263 509 ProSiteProfiles Protein kinase domain profile. 186 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0263 509 MobiDBLite consensus disorder prediction 486 501 - -
Mibi08g0263 509 FunFam Putative receptor-like protein kinase 168 261 - -
Mibi08g0263 509 FunFam Putative receptor-like serine/threonine-protein kinase 262 472 - -
Mibi08g0263 509 SMART serkin_6 186 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0263 509 PANTHER OS01G0323000 PROTEIN 1 481 - -
Mibi08g0263 509 Pfam Protein kinase domain 189 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0263 509 Gene3D Phosphorylase Kinase; domain 1 168 261 - -
Mibi08g0263 509 ProSitePatterns Protein kinases ATP-binding region signature. 192 215 IPR017441 GO:0005524
Mibi08g0263 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Mibi08g0263 509 Coils Coil 206 226 - -
Mibi08g0263 509 SUPERFAMILY Protein kinase-like (PK-like) 170 460 IPR011009 -
Mibi08g0263 509 Gene3D Transferase(Phosphotransferase) domain 1 262 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0263 Mibi-ChrMibi08 3894985 3898382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0263 17 460 Trihelix Transcription Factor Family AT1G70460 40.000 3.15e-99 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi08g0263 Pkinase 5e-49 CL0016