Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0250 ATGATTAATCACGAAACTGTGAAAGAAGCCGTGAGATCGCTCTTGAAGTGGAGACAATCACTTCCTCCTCAAGAAGACGAATTCTTGCACCTCCTTCTCTACCTCAACGAAATCCCCCATACCGATGCCGATCAAATTTACCACATTCCTCTCCCCCACCGTCTCCTCCGCAAATCCCCCAACCTCTGTCTAATCATCGACGACACTCACGTGGACGATGCGCACAACAAGGTCAAATCGGAGAATCTACCAGTCTCAAAGCTCTTGAATCTCTCGAATCTCAAGTCCGATTACCGTACATCCGAGGCGAGGCGAGAGCTATGCGATTGCTACGATCTGTTCTTGGCGGAGGAGAGTGTGATTCCGAGGTTGACTCGCATATTAGGGACGAAGAAGAAGGCTCCTGTGCCGTTGGATCTGAAGGATAGGGATTGGAAGGCGCAGATTGAGAGGGCTTTTTCTTGTACATCGTTGTGTTTGAATAGTTGGAATTGTTATGAGGTGAGAGTCGCTGAAGTGTTGTTGATGACGAAGGTTGAGATTGTTGAGAATGTGATTGCTGCTTGTAACGGTATCGCCGATGTTATTCCAGGGAATTGGGGGAATATAAGGTCGCTTCACTTGAGACTGTTTGGTTCTCATCAATTACGGATTTACCGCTCTGTTCCGATTTCTACAATCTCCGAAAGAATTGGCATAATAACTGTGCGAAAAGCCGTGAGGGATCTCCTGAATTGGAGAAAATCAAAGTCATCGTCGGATGAAGAAGACGGATTCTTGTACCTTGATCTGTACCTCAAGGAAATTCCCCATCCTGATAATCTGAGGGATTACGTCATCGTTCTACGTCATTCTATTCTCTCCGAATCTCCCAAGCTCTGTTTAATCGTCGATGACAGTCACGATGAAGAGGAAGGATTCACCAAGGAAGAGTCGCAGGAGAAGATCAATTCGGAGAATTTACAGATTTCAAATGTCTTGAAGCTCTCGGAGCTTAAGTCTGATTACCCTTCATCTGAGGCCAGGCGAGAGCTATGTGATTGTTATGATGAGTTTTTGGCGGAGGAAAGTATTATTCCGAGGTTGATTGGGATATTGGAGAAGAAGGAGCCTTTGTGGTTTGATTTCACTGATGGGAACTGGGAAAGGCAGATTGAGAGGGCTTGTTGTTCTACATCGTTGTGTTTGAGTAATGGTACGTATTATGTGGTGAGAGTGGCCCAGGTGTCCATGGAGATGTATGAGATTGTTGAGAATGTGCTTTCTGCTATTATTGGCATCTCCTGTATTGTGCCCAATCATTGGGGGAATATTGCTTCACTTCACTTGAGGCTCTTGGGGTCTCATCAATTACCGATTTATCAGGATTCTTGA 1374 0.4541 MINHETVKEAVRSLLKWRQSLPPQEDEFLHLLLYLNEIPHTDADQIYHIPLPHRLLRKSPNLCLIIDDTHVDDAHNKVKSENLPVSKLLNLSNLKSDYRTSEARRELCDCYDLFLAEESVIPRLTRILGTKKKAPVPLDLKDRDWKAQIERAFSCTSLCLNSWNCYEVRVAEVLLMTKVEIVENVIAACNGIADVIPGNWGNIRSLHLRLFGSHQLRIYRSVPISTISERIGIITVRKAVRDLLNWRKSKSSSDEEDGFLYLDLYLKEIPHPDNLRDYVIVLRHSILSESPKLCLIVDDSHDEEEGFTKEESQEKINSENLQISNVLKLSELKSDYPSSEARRELCDCYDEFLAEESIIPRLIGILEKKEPLWFDFTDGNWERQIERACCSTSLCLSNGTYYVVRVAQVSMEMYEIVENVLSAIIGISCIVPNHWGNIASLHLRLLGSHQLPIYQDS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0250 457 Gene3D - 60 154 IPR016095 -
Mibi08g0250 457 CDD Ribosomal_L1 236 453 IPR028364 -
Mibi08g0250 457 CDD Ribosomal_L1 7 218 IPR028364 -
Mibi08g0250 457 SUPERFAMILY Ribosomal protein L1 237 454 IPR023674 -
Mibi08g0250 457 Pfam Ribosomal protein L1p/L10e family 249 444 IPR028364 -
Mibi08g0250 457 Pfam Ribosomal protein L1p/L10e family 15 209 IPR028364 -
Mibi08g0250 457 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 9 194 - -
Mibi08g0250 457 SUPERFAMILY Ribosomal protein L1 2 219 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0250 Mibi-ChrMibi08 3764504 3765877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0250 2 219 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 25.676 1.51e-08 53.1