Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0249 ATGATTAACCCCGAAGATGCGGAAAAAGCCGTGGGATTGCTCTTGGAGTGGAGAAAATCCCTTCCTCGTTACCATTTTCAAGAAGACGAATTCTTGCGCCTCATCGTCTACCTCAATGAAATCCCCCATCCTGATGCCGCTAATACCTACCACATTCCTCTCCCTCATCGTCTTCTCCCTAAATCCCCCAAACTCTGTCTAATCATCGATGACACTCACAACAATGAAGAAAATCTCACCATCTACGAGGCGCGCAAGAAGATCGAATCGGAGAAGTTACCTATTTCGCTTGTCTTGAATCTCACGGAGCTTAGGTCCGATCACCGTTCATTTGAGGCGAGGCGAGAGCTACGCGATTCTTACGATGTGTTCTTGGCGGAGGAGAGTGTGATTCCGAAGTCGACTGGCATATTAGGGAAGAAGAAGGTTCCTGTGCCATTGGATTTGAAGGATAGTGATTGGAGGGCGCAGATTGAGAAGGTATCTTCTTGTGCATTGTTGCGTTTGAATAATTGGAATTCTTCTGTGGTGAGAGTGGCTGACGTGTTGTTGATGAGGGAGGATGAGATTTTTGAGAATGTGATTGCTGCTTGTAATGGAATTGCTGGTGTTGTTTCCGGGAATTGGGAGAATATAAGGTCGCTTCACTTGAGGCTGTTTGGTTCTCATTCATTACCGATTTATCAAACAGTTCTGGTTAAACCTGAAACTGTGGAAGATGCCGTGAGGAATCTCTTGAGGTGGAGAAAATCAAAGTCATCGGATAAAGAAGACAAGTTCTTGTACCTTGATCTCTACTTTAAGGAAATTCCCCATCCTGATAGCCCGAGGGATTACATGATCTTTCTCCGTCATTCTATTCTCTCTGAATCTCCCAAGCTCTGTTTGATTATCGATGACAGTCACGACGACGAGGAAGGATTCACCAAGGAAGAGGCGCAGGAGAAGATCAAATCGGAGAATTTACAAGTTTCAAATGTCTTGAAGCTCTCGGAGCTTGAGACCGATTACCAATCATCGGAGGAGAGGCGAGAGCTATGTGATTCTTACGATGTGTTTTTGGCGGAGGAGAGTGTTATTCCGCTGTTGGCTGGCCTACTGGAGAAGAAGATCTCTGTGAGGTTTGATTTCATGGATGGGGACTGGAAAGGGCAGATTGAGAAGGCTTGTTGTTCTACTTTGTTGTGTTTGAGTACTGGTACCTATTATGAGGTGAGAGTGGCTAAAGTGTCAATGGAGATGCATGAGATTGTTGAGAATGTGGTTTATACTATTGATGGCATCGCCAATGTTGTTCCCAATCATTGGGGGAATATTGGTTCACTTCACTTGAGGCTGTTGGGGTCTCATTCATTACCGATTTATCAGTCAGTTCCAGATGAGGATTCTGATTAG 1395 0.4487 MINPEDAEKAVGLLLEWRKSLPRYHFQEDEFLRLIVYLNEIPHPDAANTYHIPLPHRLLPKSPKLCLIIDDTHNNEENLTIYEARKKIESEKLPISLVLNLTELRSDHRSFEARRELRDSYDVFLAEESVIPKSTGILGKKKVPVPLDLKDSDWRAQIEKVSSCALLRLNNWNSSVVRVADVLLMREDEIFENVIAACNGIAGVVSGNWENIRSLHLRLFGSHSLPIYQTVLVKPETVEDAVRNLLRWRKSKSSDKEDKFLYLDLYFKEIPHPDSPRDYMIFLRHSILSESPKLCLIIDDSHDDEEGFTKEEAQEKIKSENLQVSNVLKLSELETDYQSSEERRELCDSYDVFLAEESVIPLLAGLLEKKISVRFDFMDGDWKGQIEKACCSTLLCLSTGTYYEVRVAKVSMEMHEIVENVVYTIDGIANVVPNHWGNIGSLHLRLLGSHSLPIYQSVPDEDSD 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0249 464 SUPERFAMILY Ribosomal protein L1 9 228 IPR023674 -
Mibi08g0249 464 Gene3D - 79 165 IPR016095 -
Mibi08g0249 464 Coils Coil 310 330 - -
Mibi08g0249 464 Gene3D - 307 377 IPR016095 -
Mibi08g0249 464 CDD Ribosomal_L1 238 454 IPR028364 -
Mibi08g0249 464 Gene3D - 166 218 - -
Mibi08g0249 464 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 241 430 - -
Mibi08g0249 464 SUPERFAMILY Ribosomal protein L1 235 455 IPR023674 -
Mibi08g0249 464 CDD Ribosomal_L1 7 227 IPR028364 -
Mibi08g0249 464 Pfam Ribosomal protein L1p/L10e family 25 218 IPR028364 -
Mibi08g0249 464 Pfam Ribosomal protein L1p/L10e family 251 445 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0249 Mibi-ChrMibi08 3760749 3762143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0249 42 218 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 26.374 1.43e-07 50.4