Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0229 ATGAAGCTCCATCTTCTACTTTCCCTTCTCTCCTTCATCTTCCTCCCTCAAATCGCTTCTGCAGCCACCCCAAAGCTCAGCATTCATGAAGTGAAGGCATTGAAGGAGATAGGGAAGAAGTTGGGGAAGAAGGAGTGGGACTTTGGAGTAGATCCTTGCAGTGGAAAAGGCAAATGGAATGTATCAGATGATAGGAAAGGTTTTGCCAGCTCTGTCCTCTGTGATTGCTCCTTCAAACTCAATTCCTCTTGCCATGTTGTATCCATATTGTTGAAGGCTCAGAATCTTTCCGGTACTCTTCCACCAGAGTTTTCCAAACTTCAGTATCTCAAGCAATTGGATCTTAGTCGTAATATCTTCACTGGTTCTATACCTCAGCAATGGGCTGCTATGCACTTGGAAGAGCTCTCTCTTATGGGGAACAAATTATCAGGTCCTTTTCCTAAAGTTCTCACCAATATCACAACCCTCAGAAACCTGAGTATTGAAGGGAACCTGTTTTCAGGCCACATTCCTCCAGAGATTGGAAAATTGGTCAATTTAGGGAAAATCATTCTGTCATCAAATGGATTCACAGGAGAATTGCCGCTGGCTCTTTCAAAGTTGACCAAGTTGACTGATTTGAGGATTAGTGACAATAATTTCTCTGGGAGGATTCCCGATTTCATTAGCAAGTTGACATCAATTGAAAAGCTGCACATTGAGGGTTGCTCACTTGAGGGACCCATACCTTCCAGCATTTCTGCCTTGAGAAGATTAAGTGATTTGAGGATAACTGACCTGAAAAGTAGAGGTTCATCTTTCCCATCATTGGGTTATATGAAATCAATGAAGACCCTTATACTGAGGAGATGCTTGATTAAAGGAGAGATCCCTGACTATATTGGTAATATGAACAAACTTAAAATCTTAGACTTGAGTTTCAATGGCTTGACTGGAAGGATACCTGACAATTTTGACCAACTCGACAAAGTAGACTTCATGTATCTTACTGGGAACAAGCTAACAGGGACTATTCCTAGCTGGGTTCTCGGAAGAAATACAAATGTTGACATTTCTGACAATAACTTTAGCTGGGAGAGCTCAAGTCCAGTTGAATGTCCAAGAGGGAGTGTAAATTTAGTGGAGAGCTACTCTTCTTCTGCGAATAAACTAAAAAATGTTCACTCATGCTTGAAAAAGAACTTTCCATGCTCTGATTCTGACAGCCAACATTACTCCTTGCACATTAACTGTGGTGGTAAGGAAGAAAATATCAATGGTACTATTTATGAAGGGGACAGAGAACAAAGAGGTGCTTCAATGCTTTACTATGGCAAGAATTGGGCTCTCAGCAGCACCGGGAACTTCATGGACAATGATATTGATTCTGATCCCTATATTGTGACCAACACTTCCAAACTTGTCAATGTCTCAGCTAAATTTTCAGAACTATACACCACAGCTCGTTTGTCCCCACTTTCCCTCACATACTATGGACTCTGTCTAATAAATGGAAACTACACTGTTAGGCTCCACTTCGCAGAGATTCTGTTTACCAATGATAGATCATTTAATAGTCTTGGGAGGCGTGTGTTTGACGTCTACATCCAGGGGAAGCTGGTCCTAAAGGACTTCAATATTGAGAAAGAAGCTGGTGGGACTGGAAAGCCGATTATGAAGACATTTAATGCCACTGTCACACAACATTCTTTGAAGATTCACTTTTACTATGCTGGAAAGGGCACAACTGGCATACCCACAAGAGGAATTTATGGACCTCTAATATCTGCCATATCAGTAGATCCTAATTTTAAACCTCCATCACCAGGGATTGGAAAGAGAACGTTTATTATAGTGGCATCTGCCGTGTCAGCTGCTCTTGCACTTCTTATTCTGATGCTCTTAGGTATTATGAGGTGGAAGGGCTGGTTAGGAGGCCAGGACTCTGTGTATAAAGAGCTTAGAGGAATAGACCTGCAGACAGGATTATTCACATTAAGACAAATCAAATCAGCAACCAAAAACTTTGATGCTACTAACAAAATTGGAGAAGGTGGCTTTGGTTCTGTTTACAAGGGTCTACTATCCGATGGCACGGTAATTGCAGTAAAGCAACTCTCTTCAAAATCTAAGCAAGGAAACCGTGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCCAATCTTGTACAGCTTTATGGATGTTGTGTGGAAGGGAACCAGTTGATACTGATATATGAGTATATGGAAAATAATTGTCTATCACGTGCACTTTTTGGAAAAGATCCAGCATGCAAAGCAAAACTAGACTGGACAGCTAGGAAGAAAATTTGCATTGGTATAGCTAGAGCTATGGCTTATCTGCATGAAGAGTCCAGAATAAAAATCATCCATAGGGATATAAAGACTAGTAATGTGTTGCTAGATAAAGATTTTAACGCTAAGGTTTCAGATTTTGGTTTGGCAAAACTTAATGAAGATGATAATACCCATATCAGCACTCGAGTTGCTGGAACCATTGGTTATATGGCTCCTGAGTATGCAATGCGTGGATATTTGACTGACAAAGCTGACATATATAGCTTTGGGGTGGTTATGTTGGAAACTGTCAGTGGAAAGAGCAATACAAATTACAGACCCAATGAAGAATTCGTTTACCTTCTTGATTGGGCCTATGTTCTGCAAGAGAGAGGAAATCTACTGGAGTTGGTTGATCCAGACTTAGGATCAAACTATTCAACCGAGGAGGCTATGGTTATGCTAAATGTGGCTCTCTTGTGTACCAATGCATCCCCAACACTTAGGCCAAAAATGTCCCAAGTTATAAGCATGCTTGAAGGCCAAACAGATATTCAGGATTTGCTTTCTGACCCAGGATACTCTGCAAGCAGTTCCAAACACAGGTCCATAAGGAATCACTTCTGGCAAAACGCAGATACTGATTCTTCTAGTTCATACCTTGGCACAGAAGAAAGCTACCATCTTGTACAAGTTAACCCTGACAGATCAGATACGTAA 3009 0.4098 MKLHLLLSLLSFIFLPQIASAATPKLSIHEVKALKEIGKKLGKKEWDFGVDPCSGKGKWNVSDDRKGFASSVLCDCSFKLNSSCHVVSILLKAQNLSGTLPPEFSKLQYLKQLDLSRNIFTGSIPQQWAAMHLEELSLMGNKLSGPFPKVLTNITTLRNLSIEGNLFSGHIPPEIGKLVNLGKIILSSNGFTGELPLALSKLTKLTDLRISDNNFSGRIPDFISKLTSIEKLHIEGCSLEGPIPSSISALRRLSDLRITDLKSRGSSFPSLGYMKSMKTLILRRCLIKGEIPDYIGNMNKLKILDLSFNGLTGRIPDNFDQLDKVDFMYLTGNKLTGTIPSWVLGRNTNVDISDNNFSWESSSPVECPRGSVNLVESYSSSANKLKNVHSCLKKNFPCSDSDSQHYSLHINCGGKEENINGTIYEGDREQRGASMLYYGKNWALSSTGNFMDNDIDSDPYIVTNTSKLVNVSAKFSELYTTARLSPLSLTYYGLCLINGNYTVRLHFAEILFTNDRSFNSLGRRVFDVYIQGKLVLKDFNIEKEAGGTGKPIMKTFNATVTQHSLKIHFYYAGKGTTGIPTRGIYGPLISAISVDPNFKPPSPGIGKRTFIIVASAVSAALALLILMLLGIMRWKGWLGGQDSVYKELRGIDLQTGLFTLRQIKSATKNFDATNKIGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVQLYGCCVEGNQLILIYEYMENNCLSRALFGKDPACKAKLDWTARKKICIGIARAMAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLNEDDNTHISTRVAGTIGYMAPEYAMRGYLTDKADIYSFGVVMLETVSGKSNTNYRPNEEFVYLLDWAYVLQERGNLLELVDPDLGSNYSTEEAMVMLNVALLCTNASPTLRPKMSQVISMLEGQTDIQDLLSDPGYSASSSKHRSIRNHFWQNADTDSSSSYLGTEESYHLVQVNPDRSDT 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0229 1002 SMART serkin_6 670 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0229 1002 Pfam Malectin domain 407 592 IPR021720 -
Mibi08g0229 1002 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 640 745 - -
Mibi08g0229 1002 SUPERFAMILY Protein kinase-like (PK-like) 655 944 IPR011009 -
Mibi08g0229 1002 FunFam Putative LRR receptor-like serine/threonine-protein kinase 746 954 - -
Mibi08g0229 1002 Pfam Protein tyrosine and serine/threonine kinase 673 941 IPR001245 GO:0004672|GO:0006468
Mibi08g0229 1002 Gene3D - 403 596 - -
Mibi08g0229 1002 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 405 597 - -
Mibi08g0229 1002 ProSitePatterns Protein kinases ATP-binding region signature. 676 698 IPR017441 GO:0005524
Mibi08g0229 1002 Gene3D Transferase(Phosphotransferase) domain 1 746 954 - -
Mibi08g0229 1002 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 978 - -
Mibi08g0229 1002 Pfam Leucine rich repeat 276 335 IPR001611 GO:0005515
Mibi08g0229 1002 CDD STKc_IRAK 676 944 - -
Mibi08g0229 1002 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 32 195 - -
Mibi08g0229 1002 Gene3D Ribonuclease Inhibitor 226 369 IPR032675 -
Mibi08g0229 1002 Gene3D Phosphorylase Kinase; domain 1 641 745 - -
Mibi08g0229 1002 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 226 373 - -
Mibi08g0229 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Mibi08g0229 1002 SUPERFAMILY L domain-like 74 358 - -
Mibi08g0229 1002 ProSiteProfiles Protein kinase domain profile. 670 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0229 1002 Gene3D Ribonuclease Inhibitor 155 225 IPR032675 -
Mibi08g0229 1002 Gene3D Ribonuclease Inhibitor 32 154 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0229 Mibi-ChrMibi08 3288193 3300776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0229 208 974 Receptor kinase-like Gene Family AT1G07650 65.718 0.0 1007
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g0229 PK_Tyr_Ser-Thr 1.7e-48 CL0016