Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0204 ATGAGAACAAAATCTTCTCGTGGAAGTAGGGCCAAAATTTCTAAAAAACCTTCCCGCCCTACTCTTCGGCCATTTCCTCCGGACGAAGATGATGCAGCTGTGCCTAAAACATCTCACGAGGGTAATCGTGATCACCTGGATGTTAGAGAGGTGGGCTCAAAAGACAATGTGGATAATGTAACTGCTGAGGGTTTAGGTCAGGACAAGATTTGTATAGATGTTTTGGATAGAAAGATTTGCATCCGTTGCAATGAGGGTGGAGAAGTATTGATTTGCAGTGAAATCAGTTGCCCTGTTGCTGTCCATGCAAAATGTATAGGCTGCAAACCTAAATTTGATGATATGGGAAACTACTACTGCCCTTATTGCTGGTTAAAACGAACACTGGCAGAGGTCCAAGTATTGAGGAATAAGGCCTTGACAGCAAAGAAGGATTTGTCAGACTTCTTAGATGGCAATGTGATCACAAGTGATGAATTGGCCCAAAAACATGGGGAAGAAAAAAGAAAAGATTTCAGTGAGGTATCCCTTGCGAAAAATGGAAGCTTCTTAGATTATAGGAATAAGCAGGGAAATGGCAGTGAGCGCACAGAGCCCTTGCAGAGAGTGGAAGATCAACAAAATGGAATGGAAGGAGTGACGGCCAATGTTGATCAACATGGAATAGTAATTGAAGGTGACACTCATGCAAAAGCTCGAGTGGCTGATTCAGGTGAGCCTATGCATCATGGGGAAGAAAATACACCAGGGCATATCGATCTGAATGATAAATCTATGACCAAGGAGAAAACTGATGTTCGTAAAATTTCAGAAGCACATAAAACCTCATTTATTGAAGGAAAAAAGGGTATTGAACCAGAGCATCCTAGATATAGTGATAAAAACATTGATGAAGGGATTCCTGAGGATGAAGCGGAAGCATCTCCTTCGAGTTCATGCCATTTGGGAAAACAGAAAGATGGACTCTCACCTGATATTGCGTTTGTCAAGGGGAAACCAGAAAGTATTGCAGCAAATGTAGATAATAAGGACACAAGGCAAGGCAGAGAGGAATTGCTTCAGAATGAATCAAAGATGCCTTCAGCAAGTACTTCTGTCAGTGAAACCAATGATTCAAGTTCTGAAGCTCTCTTGGTGAAGAAAAGACGTATCAAACGTATGGCACAGAGGCGTCCTCAGAGAGTTAAGAACGCTGAGGGTGAAAATGGTTGTCATGAGGATGAGGAAGTTACCAGTTCTGAAACTTCGAGACCGGCCCGGAAATCTTCTAAGCAAGGTCACAGCAAAAAACTGATTTCACCAACTAGAAAGCGTAGAAGATTACACTGGACAACTGAAGAAGAAAATAAACTGAAGGAAGGAGTGTTAAGATTCTCAAAGGAAAACCGGAACATCCCTTGGAGGAAAATTTTAGAATATGGTTTTGATGTATTTGATGATACTCGCACCCCAGTTGATCTTAAGGATAAATGGAGGACCATGACGGCGGGGGCAGGTAAACTACTGATCATAGCACACCTTCAGTACAAGTGGCCTGCCTTATCTTTGAGGAGTCTTTGA 1560 0.4224 MRTKSSRGSRAKISKKPSRPTLRPFPPDEDDAAVPKTSHEGNRDHLDVREVGSKDNVDNVTAEGLGQDKICIDVLDRKICIRCNEGGEVLICSEISCPVAVHAKCIGCKPKFDDMGNYYCPYCWLKRTLAEVQVLRNKALTAKKDLSDFLDGNVITSDELAQKHGEEKRKDFSEVSLAKNGSFLDYRNKQGNGSERTEPLQRVEDQQNGMEGVTANVDQHGIVIEGDTHAKARVADSGEPMHHGEENTPGHIDLNDKSMTKEKTDVRKISEAHKTSFIEGKKGIEPEHPRYSDKNIDEGIPEDEAEASPSSSCHLGKQKDGLSPDIAFVKGKPESIAANVDNKDTRQGREELLQNESKMPSASTSVSETNDSSSEALLVKKRRIKRMAQRRPQRVKNAEGENGCHEDEEVTSSETSRPARKSSKQGHSKKLISPTRKRRRLHWTTEEENKLKEGVLRFSKENRNIPWRKILEYGFDVFDDTRTPVDLKDKWRTMTAGAGKLLIIAHLQYKWPALSLRSL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0204 519 MobiDBLite consensus disorder prediction 1 45 - -
Mibi08g0204 519 MobiDBLite consensus disorder prediction 337 353 - -
Mibi08g0204 519 CDD SANT_TRF 443 495 - -
Mibi08g0204 519 MobiDBLite consensus disorder prediction 270 441 - -
Mibi08g0204 519 Pfam Myb-like DNA-binding domain 442 494 IPR001005 -
Mibi08g0204 519 SUPERFAMILY Homeodomain-like 442 496 IPR009057 -
Mibi08g0204 519 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 46 497 - -
Mibi08g0204 519 SMART sant 439 497 IPR001005 -
Mibi08g0204 519 MobiDBLite consensus disorder prediction 422 438 - -
Mibi08g0204 519 MobiDBLite consensus disorder prediction 270 298 - -
Mibi08g0204 519 SMART PHD_3 79 124 IPR001965 -
Mibi08g0204 519 MobiDBLite consensus disorder prediction 1 17 - -
Mibi08g0204 519 ProSiteProfiles Myb-like domain profile. 435 495 IPR001005 -
Mibi08g0204 519 MobiDBLite consensus disorder prediction 354 374 - -
Mibi08g0204 519 MobiDBLite consensus disorder prediction 22 45 - -
Mibi08g0204 519 MobiDBLite consensus disorder prediction 392 415 - -
Mibi08g0204 519 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 164 IPR013083 -
Mibi08g0204 519 SUPERFAMILY FYVE/PHD zinc finger 77 130 IPR011011 -
Mibi08g0204 519 Gene3D - 443 510 - -
Mibi08g0204 519 ProSitePatterns Zinc finger PHD-type signature. 80 123 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0204 Mibi-ChrMibi08 3031739 3035362 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi08g0204 Myb_DNA-binding 2.3e-06 CL0123