Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0184 ATGGGTTATATATGTGACTTTTGCGGAGATCAGAGGTCCATGGTGTACTGCCGTTCTGATGCTGCATGTTTATGCTTGTCATGTGATCGAAATGTTCATTCTGCAAATGCTCTTTCTAAGCGTCATCAGAGAACCCTTTTATGTGAGAGATGTAATTCACAACCTGCTCTTGTAAGGTGTTCTGAAGAGAAGATTACACTATGTCAGAACTGTGATTGGTTAGGTCATGGTCCTACTACATCTTCTTCAACACATAAGAGGCAAGCCGTCAATTGCTACTCTGGCTGCCCCTCAGCAGAAGAATTTTCTTCAATATGGTCATTTGTCTTGGATATCCCTTCCATGGGTGAAACTACCTGCGAGCAGGAACTAGGTTTGATGTCCATTAATGAGAACAGCAACAAAAGTTCTAGTGTTCCTTTAGAAAGCCAGAATGTATCTGGTTCAGCTCAAGTAACTGATTTACGCAGCTTCCATAAGACTTGGGCTGGGGCCTCTGCAATACCTGAGTCAAGCTCAGAACCTCATATTCTAGACCCATCAACTGGACCTACCGACGAACGTTTACCCAAGTTATACTGTCCCAGTACAAAAGGTCCTGTGCCATGTGAAAATGATGAAGATGATGACCTGTATGGGGATTTTGACATGGATGAAGTGGATCTGGATCTTGAGAACTATGAGGAACTCTTTGGTATGACTCTTACTCATTCTGAAGAACTCTTTGAAAATGGTGGAATTGATAGCTTGTTTGGGACAAAGGACGTGTCTGCTGGTGGTGATTCCAATGGTCAGGGATCTGTTGCTGCTGAGGGTTCATCGGCTGGAGTGGCCAATGCAGTGCAACCAGCATACAGCAATGCAGCCTCTGCTGATTCAATTATGAGCACTAAAACTGAACCGATTCTTTGTTTTGCGGGGAAGCAAGCGCAGTCAAATCTTTCTTTTTCTGGAGTCACTGGAGATGGTAATGCTGGAGATTATCAAGATTGTGATGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCCTGGTGTTCTCCTTGTCCTGAGAATTCAATACAATCCGCCAACCGCAGCAACGCTGTCATGCGTTATAAGGAAAAGAAGAAGACTCGCAAGTTTGAGAAAAAAGTGAGATATGCCTCTCGTAAGGCAAGAGCCGATGTCCGAAAGCGCGTGAAGGGCCGGTTTGTCAAAGCTGGGGAAGCTTATGATTATGACCCTTTGAGCCCAACCAGAACAGATTATGCAGTTGAGGGTATGAAATTGCAGAACAGGGCTGAGGTGGGAGAAAACTGTAAATTCAACGGACATGTATAG 1320 0.4455 MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSKRHQRTLLCERCNSQPALVRCSEEKITLCQNCDWLGHGPTTSSSTHKRQAVNCYSGCPSAEEFSSIWSFVLDIPSMGETTCEQELGLMSINENSNKSSSVPLESQNVSGSAQVTDLRSFHKTWAGASAIPESSSEPHILDPSTGPTDERLPKLYCPSTKGPVPCENDEDDDLYGDFDMDEVDLDLENYEELFGMTLTHSEELFENGGIDSLFGTKDVSAGGDSNGQGSVAAEGSSAGVANAVQPAYSNAASADSIMSTKTEPILCFAGKQAQSNLSFSGVTGDGNAGDYQDCDASSMLLMGEPPWCSPCPENSIQSANRSNAVMRYKEKKKTRKFEKKVRYASRKARADVRKRVKGRFVKAGEAYDYDPLSPTRTDYAVEGMKLQNRAEVGENCKFNGHV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0184 439 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mibi08g0184 439 CDD Bbox1_BBX-like 47 87 - -
Mibi08g0184 439 MobiDBLite consensus disorder prediction 169 188 - -
Mibi08g0184 439 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mibi08g0184 439 ProSiteProfiles CCT domain profile. 358 400 IPR010402 GO:0005515
Mibi08g0184 439 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 403 - -
Mibi08g0184 439 CDD Bbox1_BBX-like 4 47 - -
Mibi08g0184 439 Pfam CCT motif 358 400 IPR010402 GO:0005515
Mibi08g0184 439 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0184 Mibi-ChrMibi08 2810405 2815369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0184 1 414 C2C2-CO-like Transcription Factor Family AT3G07650 55.269 1.97e-152 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mibi08g0184 CCT 8.4e-17 CL0281